Job Description P37344 Confidence 98.52% Date Thu Jan 5 11:55:23 GMT 2012 Rank 104 Aligned Residues 196 % Identity 15% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		D	N	L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	.	.	.	.	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S	E	L	F	G	H	E
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.																							.	.	.																							.	.	.
Template Conservation																																																						.	.	.																							.	.	.
Template Sequence		E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	.	.	.	G	R	K	F	V	R	I	S	L	G	G	R	I	I	Q	G	M	K	K	A	G	K	.	.	.
Template Known Secondary structure					S	S																		S	S	S			S							S	S	S	S	S	S													.	.	.	T																		T	T		S	.	.	.
Template Predicted Secondary structure																																																						.	.	.																							.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	F	T	G	A	Q	K	R	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	L	Q	V	N	V	R	L	V	C	A	T	N	A	D	L	P	A	M	V	N	E	G	T	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	E	.	.	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	.	.	.	.	.	.	A	T	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								S	S	S					G	G	.	.	G	T		T	T	T	T	T	B				S	S	S					B		S	S								S	S	T	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																																		.	.	.	.	.	.
Template SS confidence
																				414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.							.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		R	A	D	L	L	D	R	L	A	F	D	V	V	Q	L	P	P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	.	.	.	E	R	A	R	E	T	L	L	N	Y	R	W	P	G	N	I	R	E	L	K	N	V	V	E	R	S	V
Query Conservation																																																			.	.	.
Alig confidence																			.	.	.	.																													.	.	.
Template Conservation																			.	.	.	.
Template Sequence		P	G	P	L	R	D	R	M	E	I	I	N	I	A	G	Y	T	.	.	.	.	E	I	E	K	L	E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G	V	R	S	L	E	R	Q	L	A	A	I	C
Template Known Secondary structure																			.	.	.	.											T									T				G	G	G																			S	S	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.					.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions