Job Description P37344 Confidence 99.79% Date Thu Jan 5 11:55:23 GMT 2012 Rank 16 Aligned Residues 240 % Identity 24% Template c3k1jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1 Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.															.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	N	L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	P	F	I	S	L	N	C	A	A	L	N	E
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		I	D	Q	V	I	G	Q	E	H	A	.	.	.	.	V	E	V	I	K	T	A	A	N	Q	K	R	H	V	L	L	I	G	E	P	G	T	G	K	S	M	L	G	Q	A	M	A	E	L	L	P	T	E	T	L	E	D	I	L	V	F	P	N	P	E	D	E	N	M	P	R	I	K	T	V	P	A	C	Q	G	R
Template Known Secondary structure							S					.	.	.	.										T	T									T	T	S	S											T	S			S	S										T	T		T	T	S								T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.																																										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	D	S	E	L	F	G	H	E	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	T	G	A	Q	K	R	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	V	E	K	Y	R	E	K	A	K	S	Q	E	S	V	L	V	P	K	L	L	V	D	N	C	G	R	T	K	A	P	F	I	D	A	T	G	A	H	A	G	A	L	L	G	D	V	R	H	D	P	F	L	G	T	P	A	H	E	R	V	E	P	G	M	I	H	R	A	H	K	G	V	L	F	I	D	E	I
Template Known Secondary structure															T												T	T		S	S							T	T																				G	G	G	G									T	T	T	S					T	T	G
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	.	.	.	.	.	.	.	.	.	.	L	Q	V	N	V	R	L	V	C	A	T	N	A	D	L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	.	.	D	V	V	Q	L	P
Query Conservation																														.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.												.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		A	T	L	S	L	K	M	Q	Q	S	L	L	T	A	M	Q	E	K	K	F	P	I	T	G	Q	S	E	M	S	S	G	A	M	V	R	T	E	P	V	P	C	D	F	V	L	V	A	A	G	N	L	D	T	V	D	K	.	.	.	.	.	M	H	P	A	L	R	S	R	I	R	G	Y	G	Y	E	V	Y	M	R
Template Known Secondary structure		G	G	S															S					B		S		T	T	S	G	G	G	G		B		S																				.	.	.	.	.	S												S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T	L	L	N	Y	R	W	.	.	.	.	.	.	.	.	.	P	G	N	I	R	E	L	K	N	V	V	E	R	S	.	.	.	V	Y	R	H	G	T	S	D	Y
Query Conservation																																															.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																															.	.															.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																															.	.
Template Sequence		T	T	M	P	D	T	I	E	N	R	R	K	L	V	Q	F	V	A	Q	E	V	K	R	D	G	K	I	P	H	.	.	F	T	K	E	A	V	E	E	I	V	R	E	A	Q	K	R	A	G	R	K	G	H	L	T	L	R	L	R	D	L	G	G	I	V	R	A	A	G	D	I	A	V	K	K	G	K	K	Y	V
Template Known Secondary structure		S																									S	S			.	.	B	B														T	T		S	T	T																							T	T		S	S	B
Template Predicted Secondary structure																															.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		246	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	D	I	I	I	D	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	E	D	V	I	E	A	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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