Job Description P37344 Confidence 99.43% Date Thu Jan 5 11:55:23 GMT 2012 Rank 54 Aligned Residues 211 % Identity 23% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	N	L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	H	L	A	.	.	.	.	.	.	.	.	.	.	.	P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																												.	.	.													.	.	.	.	.
Template Conservation																																																														.	.	.													.	.	.	.	.
Template Sequence		Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	.	.	.	N	A	T	F	I	R	V	V	G	S	E	L	.	.	.	.	.
Template Known Secondary structure		G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	.	.	.	T								G	G	G	S	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.													.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.	.	240
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	E	L	F	G	H	E	A	G	A	F	T	G	A	Q	K	R	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	L	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																																.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	V	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	.	.	.	.	.	.	.	.	.	F	D	A	R
Template Known Secondary structure		.	.	.	.				S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	.	.	.	.	.	.	.	.	.	S		S	S
Template Predicted Secondary structure		.	.	.	.																																																																.	.	.	.	.	.	.	.	.
Template SS confidence
						241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.										.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		V	N	V	R	L	V	C	A	T	N	A	D	.	.	.	L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	D	V	V	Q	L	P	P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T
Query Conservation														.	.	.
Alig confidence														.	.	.											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	V	K	I	I	G	A	T	N	R	P	D	I	L	D	P	A	I	L	R	P	G	R	F	.	.	.	.	.	.	.	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	K	M	N	L	A	E	D	V	N	L	E	E
Template Known Secondary structure		S	S								S	S	G	G	G	B						S	T	T	S		.	.	.	.	.	.	.																					T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S		B		S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.														.	.	.	.	.	.	360	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		L	L	N	Y	R	W	P	G	N	I	R	E	L	K	N	V	V	E	R	S	V	Y	R	H	.	.	.	G	T	S	D	Y	P	L	D	D	I	I	I	D	P	F	K
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K
Template Known Secondary structure				T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions