Job Description P37344 Confidence 99.39% Date Thu Jan 5 11:55:23 GMT 2012 Rank 58 Aligned Residues 222 % Identity 15% Template c3f9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase Resolution 4.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S	E	L	F	G	H	E	A	G	A	F	T	G	A	Q	K	R	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L
Query Conservation
Alig confidence																																.	.	.																												.	.	.	.
Template Conservation																																.	.	.																												.	.	.	.
Template Sequence		R	G	D	I	H	I	L	I	I	G	D	P	G	T	A	K	S	Q	M	L	Q	F	I	S	R	V	A	P	R	A	.	.	.	V	Y	T	T	G	K	G	S	T	A	A	G	L	T	A	A	V	V	R	E	K	G	T	G	E	Y	Y	.	.	.	.	L	E	A	G	A	L	V	L	A	D	G	G	I	A	V	I
Template Known Secondary structure				S								S	S			T							S	S	S	T	T		S			.	.	.					T	T		S	T	T	T	T	S					S	S	G	G	G	T	S	S		S	.	.	.	.										S	S	S
Template Predicted Secondary structure																																.	.	.																												.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.					.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																				.	.	.	.	.	.
Query SS confidence																										.	.																				.	.	.	.	.	.
Query Sequence		D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	.	.	R	V	G	G	S	Q	P	L	Q	V	N	V	R	L	V	C	A	T	N	.	.	.	.	.	.	A	D	L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	D	V	V	Q	L	P	P
Query Conservation																										.	.																				.	.	.	.	.	.
Alig confidence																										.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	I	D	K	M	R	D	E	D	R	V	A	I	H	E	A	M	E	Q	Q	T	V	S	I	A	K	A	G	I	V	A	K	L	N	A	R	A	A	V	I	A	A	G	N	P	K	F	G	R	Y	I	S	E	R	P	V	S	D	N	I	N	L	P	P	T	I	L	S	R	F	D	L	I	F	I	L	K	D	Q
Template Known Secondary structure		T	T	T	T				S												S	S	S					S	S	S	S																	T	T			S		T	T	S		S		T	T	T		S		S	S	S	G	G	G		S								T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220															.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	E	R	E	S	D	I	M	L	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T	L	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	P	G	N	I	R	E	L	K
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	E	Q	D	R	E	L	A	N	Y	I	L	D	V	H	S	G	K	S	T	K	N	I	I	D	I	D	T	L	R	K	Y	I	A	Y	A	R	K	Y	V	T	P	K	I	T	S	E	A	K	N	L	I	T	D	F	F	V	E	M	R	K	K	S	S	E	T	P	D	S	P	I	L	I	T	P	R	Q	L	E
Template Known Secondary structure		T													T	T	T				S	S	S	S	T	T			T	T	T																			T									T	T	S	S		S			B		S	S	S		B		S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		231	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		N	V	V	.	.	.	E	R	S	V	Y	R	H	G	T	S	D	Y	P	L	D	D	I	I	I	D	P	F
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		A	L	I	R	I	S	E	A	Y	A	K	M	A	L	K	A	E	V	T	R	E	D	A	E	R	A	I	N
Template Known Secondary structure													T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions