Return to main results Retrieve Phyre Job Id

Job DescriptionP37344
Confidence96.49%DateThu Jan 5 11:55:23 GMT 2012
Rank233Aligned Residues64
% Identity16%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30. ........40.........50.........60.........70......
Predicted Secondary structure 




...............















Query SS confidence 


















. . . . . . . . . . . . . . .












































Query Sequence  NSFLEVLEQVSHLAPLDKP. . . . . . . . . . . . . . . VLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSE
Query Conservation                    
...............


 
  




 


 
           
               
Alig confidence 


















...............












































Template Conservation   
   
 
 
   
                   

   
  
 




  


      
  
  
  
  
  
  

Template Sequence  IIEEAVKEAVSEILETSRRIDLIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQL
Template Known Secondary structure  T

S



TS
S


TTSSTT


TT
Template Predicted Secondary structure 




























Template SS confidence 














































































   92.......100.........110.........120.........130.........140.........150.........160.........170
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions