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Job DescriptionP37344
Confidence99.66%DateThu Jan 5 11:55:23 GMT 2012
Rank27Aligned Residues211
% Identity11%Templatec3bosA_
PDB info PDB header:hydrolase regulator,dna binding proteinChain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.. ... ..10.........20.........30.........40.........50.........60.........70.........
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Query Sequence  AEY. KDN. LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFG
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Template Sequence  DDETFTSYYPGNDELIGALKSAAS. . GDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGL
Template Known Secondary structure  TT
STTTS



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STTSSTT

GGGGGGS
GGGGTTG
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   22.......30.........40..... ....50.........60.........70.........80.........90.........
 
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Query Sequence  HEAGAFTGAQKRHPGRFERADGGTLFLDELATAP. . MMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVN
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Template Sequence  EQFD. . . . . . . . . . . . . . . . . . . LICIDDVDAVAGHPLWEEAIFDLYNR. . . . . . . . . VAEQKRGSLIVSASASPXEAGF
Template Known Secondary structure  GGSS...................TGGGGTT
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   102... ....110.........120.........130. ........140.........150...
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  EGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSV
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Template Sequence  . . . VLPDLVSRXHWGLTYQLQPXXDDE. . . . . . . . . KLAALQRRAAXRGLQLPEDVGRFLLNR. XARDLRTLFDVLDRLD
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   154.....160.........170....... ..180.........190.........200.... .....210.........220
 
   238.240. ........250.....
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Query Sequence  YRHG. . TSDYPLDDIIIDPF
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Template Sequence  KASXVHQRKLTIPFVKEXLR
Template Known Secondary structure  T



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   221........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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