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Job DescriptionP37344
Confidence98.78%DateThu Jan 5 11:55:23 GMT 2012
Rank97Aligned Residues152
% Identity13%Templatec2w58B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20....... ..30.........40.........50.........60.........70........
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Query Sequence  KDNLLGEANSFLEVLEQVSHLAP. . . . . . LDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELF
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Template Sequence  LSDVDLNDDGRIKAIRFAERFVAEYEPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPELFRELKHSLQD
Template Known Secondary structure  SSS



STTT

TT




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TTT
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   1131........1140.........1150.........1160.........1170.........1180.........1190.........1200.........1210
 
   7980.........90.........100......... 110.........120.........130.........140.........150......
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Query Sequence  GHEAGAFTGAQKRHPGRFERADGGTLFLDEL. . ATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMV
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Template Sequence  QTMNEKLDYIKKV. . . . . . . . . . PVLMLDDLGAEASSWVRDDVFGPILQ. . . . . . . . . . YRMFENLPTFFTSNFDMQQLA
Template Known Secondary structure  ST
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T..........TT

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   1211........1220... ......1230.........1240......... 1250.........1260.........1270
 
   157..160. ........170......
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Query Sequence  NEGTF. . . . . . RADLLDRLAFDVVQL
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Template Sequence  HHLTYEEEKVKAARIMERIRYLAYPI
Template Known Secondary structure  T


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   1272.......1280.........1290.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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