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Job DescriptionP37344
Confidence96.48%DateThu Jan 5 11:55:23 GMT 2012
Rank235Aligned Residues81
% Identity16%Templatec2r2aB_
PDB info PDB header:toxinChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.... .....60......... 70.........80.........90.........100
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Query Sequence  VLIIGERGTGKELIASRLHYLSS. . . . . . RWQGPFISLNCAALN. . . . . ENLLDSELFGHEAGAFTGAQKRHPGRFERAD
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Template Sequence  CLITGTPGSGKTLKXVSXXANDEXFKPDENGIRRKVFTNIKGLKIPHTYIETDAKKLPKSTDEQLSAHDXYEWIKKPENI
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TTSS
GGGS

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SSB
S


B

TTT
SS

SSS
BGGGTTSGGGT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   101........110..
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Query Sequence  GGTLFLDELATA
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Template Sequence  GSIVIVDEAQDV
Template Known Secondary structure  T
TTGGGT
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   85....90......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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