Job Description P37344 Confidence 99.10% Date Thu Jan 5 11:55:23 GMT 2012 Rank 89 Aligned Residues 284 % Identity 12% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	N	L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	.	.	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S	E	L	F	G	H	E	A	G
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T	P	Y	R	V	L	A	D	L	L	E
Template Known Secondary structure		S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	S													S									T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		84	.	.	.	.	.	90	.	.	.	.													.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	T	G	A	Q	K	R	H	P	G	.	.	.	.	.	.	.	.	.	.	.	.	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	L	Q	V	N	V	R	L	V	C	A	T	N	A	D
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	.	.	.	.	.	.	.	.	.	I	N	S	E	V	N	K	I	S	F	I	G	I	T	N	D
Template Known Secondary structure		T	T	S					S	S	S																T			S								T							S	S		S	T								.	.	.	.	.	.	.	.	.				S											S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.										.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	D	V	V	Q	L	P	P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T	L	L	N	.	.	Y	R	W	P	G	N	I	R	E	L
Query Conservation																																																																						.	.
Alig confidence								.	.	.																						.	.	.	.	.	.																				.	.												.	.
Template Conservation								.	.	.																						.	.	.	.	.	.																				.	.
Template Sequence		V	K	F	V	D	L	.	.	.	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	.	.	.	.	.	.	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	F	K	P	G	V	.	.	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A
Template Known Secondary structure		G	G	G	G	G	G	.	.	.		T	T					T	T	T	T											.	.	.	.	.	.															B		S	S		.	.	S															T	T
Template Predicted Secondary structure								.	.	.																						.	.	.	.	.	.																				.	.
Template SS confidence
		184	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		K	N	V	V	E	R	S	V	Y	R	H	.	.	.	G	T	S	D	Y	P	L	D	D	I	I	I	D	P	F	K	R	R	P	P	E	D	A	I	A	V	S	E	T	T	S	L	P	T	L	P	L	D	L	R	E	F	Q	M	Q	Q	E	K	E	L	L	Q	L	S	L	Q	Q	G	K	Y	N	Q	K	R	A	A
Query Conservation													.	.	.
Alig confidence													.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	E	I	E	R	D	R	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	L	T	L	P	F	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A	V	Y
Template Known Secondary structure															T	T		S	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		307	.	.											310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	.	.	.	.	.	.	.	.	.	.	G	L	T	Y	H	Q	F	R	A	L	L	K	K	H
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	Y	L	N	I	C	K	K	L	G	V	E	A	V	T	Q	R	R	V	S	D	I	I	N	E	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions