Job Description P37344 Confidence 96.65% Date Thu Jan 5 11:55:23 GMT 2012 Rank 219 Aligned Residues 268 % Identity 15% Template c1xxiF_ PDB info PDB header:transferase Chain: F: PDB Molecule:dna polymerase iii, delta subunit; PDBTitle: adp bound e. coli clamp loader complex Resolution 4.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S	E	L	F	G	H	E	A	G	A	F	T	G	A	Q	K	R	H	P	G	R
Query Conservation
Alig confidence											.	.																																																													.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																																													.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	R	A	Q	L	N	E	.	.	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T								.	.				S							S																				T										S	S																	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	L	Q	V	N	V	R	L	V	C	A	T	N	A	D	L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	D	V	V	Q
Query Conservation
Alig confidence		.	.	.	.																												.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation		.	.	.	.																												.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		.	.	.	.	S	R	Q	T	L	L	L	L	L	P	E	N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	.	.	.	.	.	.	.	.	.	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	.	.	.	.	.	.	A	W	F	T	A	L	A	N	R	S	V	Q
Template Known Secondary structure		.	.	.	.	S	S									S	S		S		T	T										T	.	.	.	.	.	.	.	.	.	T			S	S								S				T	T	T	T	T	S	.	.	.	.	.	.							T	T	T
Template Predicted Secondary structure		.	.	.	.																												.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
						76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		L	P	P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T	L	L	N	Y	R	W	P	G	N	I	R	E	L	K	N	V	V	E	R	S	V	Y	R	H	G	T	S	D	Y	P	L	D	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																	.																											.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																	.
Template Sequence		V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	.	.	.	.	.	.	.	.	N	L	E	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	.	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V	N
Template Known Secondary structure									T	T													T	.	.	.	.	.	.	.	.	T														S	S	.	T	T																	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
										249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	I	I	I	D	P	F	K	R	R	P	P	E	D	A	I	A	V	S	E	T	T	S	L	P	T	L	P	L	D	L	R	E	F	Q	M	Q	Q	E	K	E	L	L	Q	L	S	L	Q	Q	G	K	Y	N	Q	K	R	A	A	E	L	L	G	L	T	Y	H	Q	F	R	A	L	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	H	F	T	P	F	H	W	V	D	A	L	L	M	G	K	S	K	R	A	L	H	I	L	Q	Q	L	R	L	E	G	S	E	P	V	I	L	L	R	T	L	Q	R	E	L	L	L	L	V	N	L	K	R	Q	S	A	H	T	P	L	R	A	L	F	D	K	H	R	V	W	Q	N	R	R	G	M	M	G
Template Known Secondary structure																T	T	S										T	S	S	T	T	T	T																						T		S	S	S	S										T			S	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		321	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		288	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions