Job Description P37344 Confidence 98.73% Date Thu Jan 5 11:55:23 GMT 2012 Rank 99 Aligned Residues 240 % Identity 12% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		D	N	L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	.	.	.	.	.	.	.	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	.	.	.	.	.	.	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L
Query Conservation																												.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V	N	A	F	N	A	P	N	L	Y
Template Known Secondary structure		S	S		S	S	S	S																	T													T	T			S	S	S																			T	T										G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		L	D	S	E	L	F	G	H	E	A	G	A	F	T	G	A	Q	K	R	.	.	.	.	.	.	.	.	.	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	.	.	.	.	.	.	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P
Query Conservation																					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	I	P	.	.	.	.	.	.	S	R	D
Template Known Secondary structure												T						T	T																		T									S	T					S		T	T	S										T					S		.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	V	N	V	R	L	V	C	A	T	N	A	D	L	P	A	M	V	N	E	G	T	F	R	A	D	L	L	D	R	L	A	F	D	V	V	Q	L	P	P	L	R	E	R	E	S	D	I	M	L	M	A	E	Y	F	A	I	Q	M	C	R	E	I	K	L	P	L	F	P	G	F	T	E	R	A	R	E	T	L
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.																		.	.
Template Conservation																																														.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	S	R	E	.	.	.	.	.	.	.	.	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	.	.	W	E	P	R	H	L	E	L	I
Template Known Secondary structure		S													T															T	T		S													.	.	.	.	.	.	.	.													B		G	G	G	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.
		218	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure						.	.	.	.	.															.	.	.
Query SS confidence						.	.	.	.	.															.	.	.
Query Sequence		L	N	Y	R	.	.	.	.	.	W	P	G	N	I	R	E	L	K	N	V	V	E	R	.	.	.	S	V	Y	R	H	G	T	S	D	Y	P	L	D	D	I	I	I	D	P	F	K	R	R	P	P	E
Query Conservation						.	.	.	.	.															.	.	.
Alig confidence						.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		S	D	V	Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E	A	M	G	R	D	S	L	S	E	D	L	V	R	K	A	V	S	E	N	E	A	A	S
Template Known Secondary structure							G	G	G	T	S																			G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions