Return to main results Retrieve Phyre Job Id

Job DescriptionP77671
Confidence54.20%DateThu Jan 5 12:31:31 GMT 2012
Rank166Aligned Residues275
% Identity11%Templated2gwga1
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60......... 70.........80.........90.........100
Predicted Secondary structure 












...............................













....
Query SS confidence 













. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .






























. . . .
Query Sequence  VDAHTHISEPGRSH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WEGYETGTRAAAKGGITTMIEMPLNQLPATV. . . .
Query Conservation 

 
 
        ...............................              
 

             ....
Alig confidence 













...............................






























....
Template Conservation 

 
 
                                           
         

  

               
Template Sequence  IDIHGHYTTAPKALEDWRNRQIAGIKDPSVXPKVSELKISDDELQASIIENQLKKXQERGSDLTVFSPRAGDFNVSSTWA
Template Known Secondary structure 





GGG


GGG



TTT






Template Predicted Secondary structure 


































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   101........110.........120.........130......... 140.........150.........160.........170.......
Predicted Secondary structure  ..















.


















Query SS confidence  . .






































.





































Query Sequence  . . DRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDE. VGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLG
Query Conservation  ..                                       .                                      
Alig confidence  ..






































.





































Template Conservation     

         
 
      
          
  

          

 
               
           
Template Sequence  AICNELCYRVSQLFPDNFIGAAXLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKXV
Template Known Secondary structure  STTT



TTS
GGGGTS



S
TTSS


S

TTSGGG
Template Predicted Secondary structure 































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   178.180.........190.........200.........210.........220.........230.........240.... .....250.....
Predicted Secondary structure 
























..
Query SS confidence 


































































. .










Query Sequence  ELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVS. . SPEGVEEVTRA
Query Conservation                                                       
   
         ..           
Alig confidence 






























....................















..










Template Conservation       
  
                      ....................
    
 
 


 
 
   
         
Template Sequence  ELEIPAXIHVSTGAHYLNADTTAFXQCVAGD. . . . . . . . . . . . . . . . . . . . LFKDFPELKFVIPHGGGAVPYHWGRFRGL
Template Known Secondary structure  T





TTS
....................
TT

SGGGTTTGGG
Template Predicted Secondary structure 











....................










Template SS confidence 















































































   170.........180.........190.........200 .........210.........220.........
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  RQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGI
Query Conservation                                   
          
      
     


                    
Alig confidence 







.............






























.

















.........
Template Conservation          .............                        
   
 
.






 
         .........
Template Sequence  AQEXKKPL. . . . . . . . . . . . . LEDHVLNNIFFDTCVYHQPGIDLLNTVIPVD. NVLFASEXIGAVRGIDPR. . . . . . . . .
Template Known Secondary structure  TT


.............TTTT



SS
GG.G




SSS


TT.........
Template Predicted Secondary structure 




.............













.












.........
Template SS confidence 















































































   239240...... ...250.........260.........270....... ..280.........290.....
 
   336...340.........350.........360.........370.. ...
Predicted Secondary structure 









.


Query SS confidence 




































.


Query Sequence  AGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIF. GLQ
Query Conservation                     

  


   
   
  
.
  
Alig confidence  ..


































.


Template Conservation  ..                 

      
   

 


 

 
Template Sequence  . . TGFYYDDTKRYIEASTILTPEEKQQIYEGNARRVYPRLD
Template Known Secondary structure  ..TTTT
T
SSS
T
Template Predicted Secondary structure  ..











Template SS confidence 








































   296...300.........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions