Phyre 2 alignment of P77671 with d2dvta1

Job Description P77671
Confidence 96.96% Date Thu Jan 5 12:31:31 GMT 2012

Rank 144 Aligned Residues 294

% Identity 15% Template d2dvta1

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like

Resolution 1.70

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	Q	G	K	V	A	L	E	E	H	F	A	I	P	E	T	L	Q	D	S	A	G	F	V	P	G	D	Y	W	K	E	L	Q	H	R	L	L	D	I	Q	D	T	R	L	K	L	M	D	A	H	G	I	E	T	M	I	L	S	L	N	A	P	A	V	Q	A	I	P	D	R	R	K	A	I	E	I	A	R	R	A
Template Known Secondary structure			S															G	G	G	T	T	T	S		S	S												S	S	S									T	T										S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

	102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D	R	L	H	E	.	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G
Query Conservation																																				.
Alig confidence																																				.											.	.
Template Conservation																																															.	.
Template Sequence	N	D	V	L	A	E	E	C	A	K	R	P	D	R	F	L	A	F	A	A	L	P	L	Q	D	P	D	A	A	T	E	E	L	Q	R	C	V	N	D	L	G	F	V	G	A	L	.	.	V	N	G	F	S	Q	E	G	D	G	Q	T	P	L	Y	Y	D	L	P	Q	Y	R	P	F	W	G	E	V	E	K	L	D
Template Known Secondary structure												T	T	T									T	T	S														T	T							.	.			S	S	B			T	T			S		B		T	T	S	G	G	G											T
Template Predicted Secondary structure																																															.	.
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

	181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q
Query Conservation
Alig confidence																																																		.	.														.	.
Template Conservation																																																		.	.														.	.
Template Sequence	V	P	F	Y	L	H	P	R	N	P	L	P	Q	D	S	R	I	Y	D	G	H	P	W	L	L	G	P	T	W	A	F	A	Q	E	T	A	V	H	A	L	R	L	M	A	S	G	L	F	D	.	.	E	H	P	R	L	N	I	I	L	G	H	M	G	.	.	E	G	L	P	Y	M	M	W	R	I	D	H	R	N
Template Known Secondary structure												G	G	G		G	G	G	T	T		G	G	G	S	G	G	G	T																T	T				.	.			T	T						S	G	G	G	.	.	T	T											T	T
Template Predicted Secondary structure																																																		.	.														.	.
Template SS confidence
	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.

	261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	E	E	I	G	T	L	A	K	C	S	P	P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S
Query Conservation
Alig confidence																																															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	W	V	K	L	P	P	R	Y	P	A	K	R	R	F	M	D	Y	F	N	E	N	F	H	I	T	T	S	G	N	F	R	T	Q	T	L	I	D	A	I	L	E	I	G	A	D	.	.	R	I	L	F	S	T	D	W	P	F	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T	T			S			S	S	S		S	S															T	T												T	T	T		G	G	.	.	G							T	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.

	341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q
Query Conservation
Alig confidence	.	.	.
Template Conservation	.	.	.
Template Sequence	.	.	.	D	H	A	S	D	W	F	N	A	T	S	I	A	E	A	D	R	V	K	I	G	R	T	N	A	R	R	L	F	K	L	D
Template Known Secondary structure	.	.	.										S	S	S										T							T	T
Template Predicted Secondary structure	.	.	.
Template SS confidence
				294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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