 |
Job Description | P77671 | Confidence | 27.21% | Date | Thu Jan 5 12:31:31 GMT 2012 |
Rank | 183 | Aligned Residues | 33 |
% Identity | 12% | Template | d1n9ra_ |
SCOP info | Sm-like fold
| Sm-like ribonucleoproteins
| Sm motif of small nuclear ribonucleoproteins, SNRNP
|
Resolution | 2.80 |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | D | L | I | I | K | N | G | T | V | I | L | E | N | E | A | R | V | . |
. |
V | D | I | A | V | K | G | G | K | I | A | A | I | G | Q |
Query Conservation |   |
  |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   | . | . |   |   |
|   |
|   |   |
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
F | N | L | Q | L | N | E | A | E | E | F | V | A | G | V | S | H | G | T | L | G | E | I | F | I | R | C | N | N | V | L | Y | I | R | E |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|
| S |  |  |  |
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|