Job Description P77671 Confidence 99.97% Date Thu Jan 5 12:31:31 GMT 2012 Rank 63 Aligned Residues 325 % Identity 28% Template d1gkpa2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 1.29

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		M	V	D	A	H	T	H	I	S	E	P	G	R	S	.	.	H	W	E	G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D
Query Conservation																.	.
Alig confidence																.	.																												.
Template Conservation																																													.
Template Sequence		F	I	D	P	H	V	H	I	Y	L	P	F	M	A	T	F	A	K	D	T	H	E	T	G	S	K	A	A	L	M	G	G	T	T	T	Y	I	E	M	C	C	P	S	.	R	N	D	D	A	L	E	G	Y	Q	L	W	K	S	K	A	E	G	N	S	Y	C	D	Y	T	F	H	M	A	V	S	K	F	D	E	K
Template Known Secondary structure									S	S				T	T				S													T	T												.	T	T	S														T	T	T		S	S													T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		T	E	G	Q	L	R	E	I	V	A	D	G	I	S	S	F	I	F	L	.	.	.	.	.	S	Y	K	N	F	F	G	V	D	D	G	E	M	Y	Q	T	L	R	L	A	K	E	L	G	V	I	V	T	A	H	C	E	N	A	E	L	V	G	R	L	Q	Q	K	L	L	S	E	G	K	T	G	P	E	W	H	E
Template Known Secondary structure												T	T			B					.	.	.	.	.		S	T	T	T	T	B																	T								S															T	T			S	G	G	G	T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	E	.	.	.	E	I	G	T	L	A	K	C	S	P
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		P	S	R	P	E	A	V	E	A	E	G	T	A	R	F	A	T	F	L	E	T	T	G	A	T	G	Y	V	V	H	L	S	C	K	P	A	L	D	A	A	M	A	A	K	A	R	G	V	P	I	Y	I	E	S	V	I	P	H	F	L	L	D	K	T	Y	A	E	R	G	G	V	E	A	M	K	Y	I	M	S	P
Template Known Secondary structure		T	T	S																				T							S			S													T	T																G	G	G	G	G	S							T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	.	.	.	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.
Template Conservation
Template Sequence		P	L	R	D	K	R	N	Q	K	V	L	W	D	A	L	A	Q	G	F	I	D	T	V	G	T	D	H	C	P	F	D	T	E	Q	K	L	L	G	K	E	A	F	T	A	I	P	N	G	I	P	A	I	E	D	R	V	N	L	L	Y	T	Y	G	V	S	R	G	R	L	D	I	H	R	F	V	D	A	A	S	T
Template Known Secondary structure						T												T	T	S	S							B									G	G	G	S	S		G	G	G	S				B			T	T	T										T	T	S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		N	A	A	D	I	F	G	L	Q	Q	.	K	G	R	I	A	P	G	K	D
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		K	A	A	K	L	F	G	L	F	P	R	K	G	T	I	A	V	G	S	D
Template Known Secondary structure							T	T		T	T	T	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions