Job Description P77671 Confidence 100.00% Date Thu Jan 5 12:31:31 GMT 2012 Rank 39 Aligned Residues 377 % Identity 13% Template c3v7pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase family protein; PDBTitle: crystal structure of amidohydrolase nis_0429 (target efi-500396) from2 nitratiruptor sp. sb155-2 Resolution 1.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		M	S	F	D	L	I	I	K	N	G	T	V	I	L	E	N	E	A	R	V	V	D	I	A	V	K	G	G	K	I	A	A	I	G	Q	D	.	.	.	.	.	L	G	D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	S	H	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence				.	.	.																																.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		M	R	.	.	.	I	I	K	P	F	A	I	L	T	P	Q	T	I	I	Q	D	K	A	V	A	F	D	K	K	I	E	A	I	D	T	V	E	N	L	I	K	K	Y	P	N	A	A	V	E	H	D	E	N	S	L	L	L	P	G	F	A	N	P	H	L	H	L	E	F	S	A	N	K	A	T	L	Q	Y	G	D
Template Known Secondary structure				.	.	.										S	S	S				S						S	S	B															T	T	S																					G	G	G	T	T		S	S		S			S	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
																						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		F	I	P	W	L	Y	S	V	I	R	H	R	E	D	L	L	P	L	C	D	G	A	C	L	E	Q	T	L	S	S	I	I	Q	T	G	T	T	A	I	G	A	I	S	S	Y	G	E	D	L	.	.	.	.	.	.	.	.	Q	A	C	I	D	S	A	L	K	V	V	Y	F	N	E	V	I	G	S	N	A	A	T
Template Known Secondary structure																				S															T	T									S	S	S	T	T		.	.	.	.	.	.	.	.						B	S	S										B			G	G	G
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	V	M	Y	A	S	F	L	E	R	F	H	Q	S	K	K	H	E	N	E	R	F	K	A	A	V	A	I	H	S	P	Y	S	V	H	Y	I	L	A	K	R	A	L	D	I	A	K	K	Y	G	S	L	V	S	V	H	F	M	E	S	R	A	E	R	E	W	L	D	K	G	S	G	E	F	A	K	F	F	K
Template Known Secondary structure																		T	T		B	T	T										T	T	T	B																T								S		S										S		S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	E	E	I	G	T	L	A	K	C	S	P
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	L	N	Q	T	R	P	V	N	D	T	K	S	F	L	E	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	H	T	L	F	V	H	M	V	W	A	N	E	E	E	I	Q	T	I	A	S	Y	N	A	H	I	I	H	C	P
Template Known Secondary structure				T				S		S	S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S								T	T												S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																														.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	N	R	L	L	G	N	G	V	L	D	L	E	K	I	K	S	I	P	Y	A	I	A	T	D	G	L	S	S	N	Y	S	L	N	M	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	E	L	K	A	A	L	F	V	H	P	N	K	E	A	T	T	F	A	K	E	L	I	I	R	A	T	K	A	G	Y
Template Known Secondary structure							T	T						T	T	T	T	T	T	S									T	T	S		S					.	.	.	.	.	.	.	.	.	.	.	.											S	T	T	S														T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.													.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	F	G	L	Q	Q	K	G	R	I	A	P	G	K	D	A	D	F	V	F	I	Q	P	N	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	G	R	T	I	G	A	R	I	T	K	T	I	L	R	G	D	V	I	Y	D	I	E	Q	G
Query Conservation
Alig confidence							.																																						.	.	.	.	.	.	.	.
Template Conservation							.																																						.	.	.	.	.	.	.	.
Template Sequence		D	A	L	G	F	.	E	G	G	E	I	A	V	G	K	D	A	D	M	Q	L	I	D	L	P	E	G	L	T	N	V	E	D	L	Y	L	H	V	I	L	H	T	T	.	.	.	.	.	.	.	.	K	P	K	K	V	Y	I	Q	G	E	E	H	V	R	N	L	Y	F
Template Known Secondary structure					T		.	S		S	S			T	T	S	B										T	T				G	G	G										S	.	.	.	.	.	.	.	.	S		S					T	T									B
Template Predicted Secondary structure							.																																						.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390									.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.