Return to main results Retrieve Phyre Job Id

Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank31Aligned Residues345
% Identity19%Templatec3nqbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:adenine deaminase 2; PDBTitle: crystal structure of adenine deaminase from agrobacterium tumefaciens2 (str. c 58)
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10....... ..20.........30...... ...40.........50.........60.........70......
Predicted Secondary structure 









..




..























Query SS confidence 
















. .


















. .







































Query Sequence  MSFDLIIKNGTVILENE. . ARVVDIAVKGGKIAAIGQD. . LGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETG
Query Conservation 
  
 

 
  
     ..     
 
  
 
  

  ..      


  
  
 




 
 
               
Alig confidence 
















..


















..


































....
Template Conservation    







 



    
   

 
 



  

       
 




 
  
 




 
 

  
      .... 
Template Sequence  QRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHXHIESSXITPAA. . . . Y
Template Known Secondary structure  S
S
TTTT
TT
TTS



TTS

GGGGTS
....
Template Predicted Secondary structure 












































....
Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.... .
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  TRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRG
Query Conservation         
 

                                                                     
Alig confidence 
















.















































..............
Template Conservation      
  
 



    .    
 
  
                   

 

     
        ..............
Template Sequence  AAAVVARGVTTIVWDPH. EFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDA. . . . . . . . . . . . . .
Template Known Secondary structure  TTT

.TTT
SS


SSSSTTS


S



..............
Template Predicted Secondary structure 






.































..............
Template SS confidence 















































































   106...110.........120.. .......130.........140.........150.........160.........170
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  IDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGC
Query Conservation                                                                            
   
 
Alig confidence  .....................................










































Template Conservation  .....................................  
           
 
                 
  
   
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AILADLLSWPEIGGIAEIXNXRGVIERDPRXSGIVQAGLAAEK
Template Known Secondary structure  .....................................TSTT

TT
T
Template Predicted Secondary structure  .....................................



















Template SS confidence 















































































   171........180.........190.........200.........210...
 
   237..240.........250.........260.........270.........280......... 290.........300.........310....
Predicted Secondary structure 


















..





Query SS confidence 




















































. .
























Query Sequence  RLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSP. . PIRDLENQKGMWEKLFNGEIDCLVS
Query Conservation                                                      
..          
      
     

Alig confidence 





..


























...














..
























Template Conservation   
 


..       
      

   
     

...       
  
 
              
      
  
 
 
Template Sequence  LVCGHA. . RGLKNADLNAFXAAGVSSDHELVSGED. . . LXAKLRAGLTIELRGSHDHLLPEFVAALNTLGHLPQTVTLCT
Template Known Secondary structure 

..TT

TT





S...T
SSSGGGTS

TT
Template Predicted Secondary structure 
..










...







Template SS confidence 















































































   214..... 220.........230.........240...... ...250.........260.........270.........280........
 
   315....320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  DHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPN
Query Conservation 
                                       

  


   
   
  

    
 
  
  






 
Alig confidence 











..............











.








































Template Conservation 

         
.............. 
   

 

  .


  


  

 


  


 
 


 


 








Template Sequence  DDVFPDDLLQGG. . . . . . . . . . . . . . GLDDVVRRLVRY. GLKPEWALRAATLNAAQRLGRSDLGLIAAGRRADIVVFEDL
Template Known Secondary structure  B



..............ST.T

TTT
TTSSS

TTSB

S
T
Template Predicted Secondary structure 











..............

.




















Template SS confidence 















































































   289290.........300 .........310.. .......320.........330.........340.........350...
 
   395....400.........410.........420.........430.........440....
Predicted Secondary structure 























Query SS confidence 

















































Query Sequence  SSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPK
Query Conservation                             
  


 
 

            
Alig confidence 


.......................























Template Conservation     ....................... 
  
   
  
   
      
 
Template Sequence  NGF. . . . . . . . . . . . . . . . . . . . . . . SARHVLASGRAVAEGGRXLVDIPT
Template Known Secondary structure  TT
.......................
TTTT
S



Template Predicted Secondary structure 


.......................










Template SS confidence 

















































   354.. ...360.........370.........380
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions