Job Description P77671 Confidence 99.86% Date Thu Jan 5 12:31:31 GMT 2012 Rank 69 Aligned Residues 315 % Identity 13% Template c3msrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolases; PDBTitle: the crystal structure of an amidohydrolase from mycoplasma synoviae Resolution 2.16 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.
Predicted Secondary structure																	.	.	.															.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																	.	.	.															.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	.	.	.	G	M	V	D	A	H	T	H	I	S	E	P	G	R	.	.	.	.	.	.	.	.	.	.	.	S	H	W	E	G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	.	.	P	A	T	V	D	R
Query Conservation																	.	.	.															.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence													.				.	.	.															.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation													.
Template Sequence		E	N	K	F	A	R	T	V	L	G	D	.	I	P	V	E	K	L	G	I	T	D	C	H	D	H	F	I	K	N	G	G	P	E	V	E	E	H	I	D	F	L	X	L	N	V	D	A	S	I	K	E	F	K	E	F	I	D	R	G	G	S	T	I	V	T	X	D	P	P	N	V	G	R	D	V	L	K	T	L
Template Known Secondary structure									T	T			.			G	G	G										S		B		S	S							G	G	G		B																T	T										T	T	T	T
Template Predicted Secondary structure													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	A	N	A	V	K	N	L	G	G	N	V	I	X	S	T	G	F	H	K	A	K	F	Y	D	K	Y	S	S	W	L	A	V	V	P	T	E	E	I	V	K	X	C	V	A	E	I	E	E	G	X	D	E	Y	N	Y	N	G	P	V	V	K	R	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G	T												G	G	G	S		T	T	T	S					S															T			B	T	T	T	T	S	S	S				B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	G	I	I	K	A	G	T	G	Y	G	A	I	D	R	L	E	L	K	A	L	E	V	A	A	R	T	S	I	L	T	G	C	P	I	L	V	H	T	Q	L	G	T	X	A	L	E	V	A	K	H	L	I	G	F	G	A	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											B	T	T	B																												G	G	G		S												T			G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.	.	.	.	.															.	.	.	.	.																				.	.
Query SS confidence															.	.	.	.	.															.	.	.	.	.																				.	.
Query Sequence		T	C	E	S	C	P	H	Y	F	V	L	D	T	.	.	.	.	.	D	Q	F	E	E	I	G	T	L	A	K	C	S	P	.	.	.	.	.	P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	.	.	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K
Query Conservation															.	.	.	.	.															.	.	.	.	.																				.	.
Alig confidence															.	.	.	.	.															.	.	.	.	.																				.	.														.	.
Template Conservation																																																																									.	.
Template Sequence		D	K	I	Q	I	S	H	L	N	K	N	P	D	K	Y	Y	Y	E	K	V	I	K	E	T	G	V	T	L	C	F	D	G	P	D	R	V	K	Y	Y	P	D	S	L	L	A	E	N	I	K	Y	L	V	D	K	G	L	Q	K	H	I	T	L	S	L	D	A	G	R	I	L	Y	.	.	Q	R	N	Y	G	L	T
Template Known Secondary structure		G	G						G	G	G	S																						T	T		T	T	T																T	T		G	G	G									S	G	G	G	.	.	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q	Q	K	G	R	I	A	P	G	K	D	A	D	F	V	F
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		K	G	K	Q	T	F	G	L	A	Y	L	F	D	R	F	L	P	L	L	K	.	Q	V	G	V	S	K	E	A	I	F	D	I	L	V	N	N	P	K	R	V	L	A	F	D	E	K	R	N	F	D	P	L	K	V	S	K	E	V	L
Template Known Secondary structure		T	T						T						T							.			T											T							T	S									G	G	G	S
Template Predicted Secondary structure																						.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions