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Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank13Aligned Residues422
% Identity28%Templatec3mpgB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dihydroorotase; PDBTitle: dihydroorotase from bacillus anthracis
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30...... ...40.........50.........60.........70.........80
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Query Sequence  FDLIIKNGTVILENE. ARVVDIAVKGGKIAAIGQD. LGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAA
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Template Sequence  MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENITADNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETGTLAA
Template Known Secondary structure 

TTS
SSBTT


TTS
TT




TTT
TTT

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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDND
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Template Sequence  AKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTD. . . . . . . . DG
Template Known Secondary structure  TT
S
SSS
S
SS
SS
SBGGG
SSSB

TT



........TT
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   81........90.........100.........110.........120.........130.........140.........150 ..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  FRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHV
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Template Sequence  VGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINK. . . GCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHV
Template Known Secondary structure  S



TT




GGG
TT...
STTTT


TT
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   153......160.........170.........180....... ..190.........200.........210.........220.........
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  CHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCP
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Template Sequence  CHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHT
Template Known Secondary structure 
S


T




GGG

SS
GGG

SS



TSS



B



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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  PEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLT
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Template Sequence  AEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL. EAGRLKEGRTADITIIDLEQEEEID
Template Known Secondary structure  S
TTTS





TTTTTTTTSS
TTTT
.S
S


TTSB

SS



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   310.........320.........330.........340.........350.........360... ......370.........380........
 
   401........410.........420.........430......
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Query Sequence  NDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIE
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Template Sequence  PTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKE
Template Known Secondary structure  GGG
SSS



TTTT


TT
S
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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