Return to main results Retrieve Phyre Job Id

Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank23Aligned Residues378
% Identity17%Templatec3lnpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10....... ..20.........30........ .40.........50.........60.........
Predicted Secondary structure 








.....






...





















....
Query SS confidence 















. . . . .




















. . .






























. . . .
Query Sequence  SFDLIIKNGTVILENE. . . . . ARVVDIAVKGGKIAAIGQDLG. . . DAKEVMDASGLVVSPGMVDAHTHISEPGRSH. . . .
Query Conservation    
 

 
  
     .....     
 
  
 
  

    ...    


  
  
 




 
 
        ....
Alig confidence 















.....




















...






























....
Template Conservation   




 

 


       

    
 
  
 
  

           


  
  
 




 
 
            
Template Sequence  HADLRINSHWIIPIENTVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLXPGWVNAHGHAAXSLFRGLADD
Template Known Secondary structure 


SS



S
TTTTT





S

S

GGGGGGTTSS
S
Template Predicted Secondary structure 




















































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   70.........80.........90.........100.........110.........120.....
Predicted Secondary structure  ........................






















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . .























































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . WEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGG
Query Conservation  ........................              
 

                                      
Alig confidence  ........................























.......
























Template Conservation                                        
         .......                         
Template Sequence  LPLXTWLQEHVWPAEAQHVDEHFVKQGTELAIAEXIQSGTTTFADXYF. . . . . . . YPQQSGEAALAAGIRAVCFAPVLDF
Template Known Secondary structure 

T
STT

S.......
T

SS
Template Predicted Secondary structure 


















.......










Template SS confidence 















































































   104.....110.........120.........130.........140.........150. ........160.........170......
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGR
Query Conservation                                                                                  
Alig confidence 















.................................................














Template Conservation                  .................................................               
Template Sequence  PTNYAQNADEYIRKAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ECNDRFNNHPXNEQG
Template Known Secondary structure 

SS
SS.................................................S
GGGTT
Template Predicted Secondary structure 






.................................................






Template SS confidence 















































































   177..180.........190.. .......200.......
 
   206...210.........220.........230.........240.........250. ........260.........270......
Predicted Secondary structure 
















.........











Query SS confidence 













































. . . . . . . . .
























Query Sequence  VTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEE. . . . . . . . . VTRARQEGQDVTCESCPHYFVLDTD
Query Conservation                           
   
                .........                         
Alig confidence 













































.........
























Template Conservation                                                                                  
Template Sequence  LVQIGFGPHAPYTVSDEPLKEITXLSDQLDXPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVHXTQVDDG
Template Known Secondary structure 


TTTS
T

S
SSS
TT

STT

S

Template Predicted Secondary structure 



























Template SS confidence 















































































   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   277..280. ........290 .........300.........310.........320.........330.........340.........350.
Predicted Secondary structure 
...


..

























Query SS confidence 




. . .








. .




























































Query Sequence  QFEEI. . . GTLAKCSPP. . IRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQ
Query Conservation       ...       
 ..         
      
     


                                    
Alig confidence 




...








..








































.........










Template Conservation                                     
     


                .........           
Template Sequence  DIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAASNNDLDXFSETKT. . . . . . . . . AALLAKGVSQD
Template Known Secondary structure 


TT




TT





TTSS



.........T
Template Predicted Secondary structure 



















.........
Template SS confidence 















































































   288.290.........300.........310.........320.........330.........340....... ..350........
 
   352.......360.........370....... ..380.........390.........400.........410.........420.........430
Predicted Secondary structure 









.

























Query SS confidence 

























.




















































Query Sequence  KRGMSLPMFGKLMATNAADIFGLQQK. GRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGD
Query Conservation     

  


   
   
  

    .
 
  
  






 
                           
  


 
 
Alig confidence 

























.






































.....








Template Conservation    


   

   
 


  


    
 
  
  




 
 
 
      
             .....
  


 
 
Template Sequence  ASAIPAIEALTXATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHXVYCTKSTQ. . . . . VSHVWVNGR
Template Known Secondary structure  TTSS
TTT
TTTSSS

TTSB



SGGG
S
S
S

GGG.....TT
Template Predicted Secondary structure 




































.....


Template SS confidence 















































































   359360.........370.........380.........390.........400.........410.........420.... .....430...
 
   431........440.........450
Predicted Secondary structure 










Query SS confidence 



















Query Sequence  VIYDIEQGFPVAPKGQFILK
Query Conservation 

            
     
Alig confidence 












.





Template Conservation   
   
     
 .      
Template Sequence  CLLKNGELTTLNE. ETLINH
Template Known Secondary structure  TTSSS
.
Template Predicted Secondary structure 





.
Template SS confidence 



















   434.....440...... ...450..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions