Job Description P77671 Confidence 99.97% Date Thu Jan 5 12:31:31 GMT 2012 Rank 65 Aligned Residues 337 % Identity 15% Template c3jzeC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 Resolution 1.80 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	S	H	W	E	G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	.	K	L	T	I	D	A	A	Q	L	G	G
Query Conservation																																																																						.
Alig confidence																				.	.	.	.	.	.																																													.
Template Conservation																				.	.	.	.	.	.
Template Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	V	H	L	R	D	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	S	P	I	T	T	V	D	A	A	I	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T
Template Known Secondary structure																			S	.	.	.	.	.	.													T	T		S								S	S	S				S															S		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	Y	N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Y	L	T	D	S	L	D	A	D	E	L	E	R	G	F	H	E	G	V	F	T	A	A	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	V	D	A	I	M	P	V	L	E	R	M	E	K	L	G	I	P	L	L	V	H	G	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T												T	T	S							B	T	T	S	S	T	T		T	T	S	B	S		T	T	T	T											T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	.	.	E	E	I	G	T
Query Conservation																																																																											.	.
Alig confidence		.	.	.																																													.	.	.																								.	.
Template Conservation		.	.	.																																													.	.	.
Template Sequence		.	.	.	H	A	D	V	D	I	F	D	R	E	A	R	F	I	D	T	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	Q	Y	V	.	.	.	R	D	G	N	D	Y	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	D	M	L	V	G	G	I	R	P
Template Known Secondary structure		.	.	.		T	T	S		G	G	G									T								S	T	T							S			S								.	.	.			S		T	T																			T	T	S			G
Template Predicted Secondary structure		.	.	.																																													.	.	.
Template SS confidence
					145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	A	K	C	S	P	P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	.	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K
Query Conservation																														.
Alig confidence																														.																		.	.																				.	.
Template Conservation																																																.	.																				.	.
Template Sequence		H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	T	R	A	F	L	G	T	D	S	A	P	H	S	R	H	R	K	E	T	S	C	.	.	G	C	A	G	C	F	N	A	P	S	A	L	G	S	Y	A	A	V	F	.	.	E	E	M	N	A	L	A	H	F	E	A
Template Known Secondary structure		G	G			S	S																	T	T		T	T							B				B					S	S	S	S	.	.								T	T	T										.	.			T	T		G	G	G
Template Predicted Secondary structure																																																.	.																				.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	M	A	T	N	A	A	D	I	F	G	L	Q	Q	K	G	R	I	A	P	G	K	D	A	D	F	V	F	I	Q	P	N	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	.	G	R	T	I	G	A	R	I	T
Query Conservation																																																						.
Alig confidence															.	.	.	.	.	.	.	.	.																															.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		F	C	S	L	N	G	P	Q	F	Y	G	L	P	.	.	.	.	.	.	.	.	.	M	N	T	G	W	V	E	L	V	R	D	E	Q	Q	I	P	G	N	I	A	L	A	D	D	S	L	V	P	F	L	A	G	E	T	V	R	W	S	V	K
Template Known Secondary structure					T							T			.	.	.	.	.	.	.	.	.																	S					S	S	S					T	T	T	T				S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions