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Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank54Aligned Residues396
% Identity13%Templatec3ighX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus horikoshii ot3
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10....... ..20.........30...... ...40.........50.........60.........70.
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Query Sequence  SFDLIIKNGTVILENE. . ARVVDIAVKGGKIAAIGQD. . . . . . . LGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWE.
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Template Sequence  SLK. ALINGTIYTSFNPLKKVSGLVISHGKVIYAGDSEVAKKIVELSGGEIVDLKGKYVMPAFFDSHLHLDELGMSLEMV
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.SSTTTTSTT



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   18.20 .........30.........40.........50.........60.........70.........80.........90......
 
   72.......80.........90.........100.........110.........120.........130.....
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Query Sequence  . . . . . GYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLH. . . . . . . . . . .
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Template Sequence  DLRGAKSIEELIQRLKRGKGRIIFGFGWDQDELGEWPTRKELNAIDKPVFIYRKCFHVAVANDKMLELLNLTPSKDFDED
Template Known Secondary structure 
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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   136...140.........150.........160.........170.........180.........190..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . ELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALI
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Template Sequence  TGIIKEKSLEEARKVINERVLTVEDYVYYIKRAQEHLLDLGVKSVSFMSVNEKALRALFYLEREGKLSINVFAYVTPEVL
Template Known Secondary structure  TTTTS
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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   193......200.........210.. .......220.........230.........240.......
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Query Sequence  CDELGEEAKREGRVTAHDYV. . . . . . . . . . . . . . . . . . . . . . . . . ASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPE
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Template Sequence  DKLESIGLGRFQGNRLTIAGVKLFTDGSLGARTALLSKPYSDDPSTSGQLVMEREELIRITEKARSLGLDVAIHAIGDKA
Template Known Secondary structure  T

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SSS


TTTT
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BTTBTT




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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   248.250.........260.........270.........280.........290... ......300.........310.....
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Query Sequence  GVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRD. . . . . . . . . . . . LENQKGMWEKLFNGEIDCLVSD
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Template Sequence  LDVALDVFETTGFPGRIEHASLVRDDQLERVKNLKVRLSVQPHFIISDWWIVERVGEERVKWVYRFKDLMKVAELGFSTD
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B

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   337..340.........350.........360.........370.........380.........390.........400.........410......
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  HSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNS
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Template Sequence  SPIEPADPWLTVDAAVNRGKGKVKLY. . . . . . ELTKDQALDIKDALHSYTYGSARVSLASDIGKLEPGFKAEYIILDRD.
Template Known Secondary structure  TTTS


TTTTT
T......GGG


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   417..420.........430.........440.. .......450.........460.........470.........480.........
 
   396...400.....
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Query Sequence  SYVLTNDDLE
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Template Sequence  PLVVKEGHHH
Template Known Secondary structure  TTTS
GGG

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   490.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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