Job Description P77671 Confidence 100.00% Date Thu Jan 5 12:31:31 GMT 2012 Rank 24 Aligned Residues 370 % Identity 19% Template c3hpaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of an amidohydrolase gi:44264246 from an2 evironmental sample of sargasso sea Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.				.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.	.	.					.	.																				.	.	.																																					.	.	.
Query SS confidence												.	.	.					.	.																				.	.	.																																					.	.	.
Query Sequence		D	L	I	I	K	N	G	T	V	I	.	.	.	L	E	N	E	.	.	A	R	V	V	D	I	A	V	K	G	G	K	I	A	A	I	G	Q	D	.	.	.	L	G	D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	S	H	W	E	G	.	.	.
Query Conservation												.	.	.					.	.																				.	.	.																																					.	.	.
Alig confidence												.	.	.					.	.																				.	.	.																																					.	.	.
Template Conservation
Template Sequence		T	L	L	V	K	H	A	D	V	L	V	T	M	D	D	T	R	R	E	L	R	D	A	G	L	Y	I	E	D	N	R	I	V	A	V	G	P	S	A	E	L	P	E	T	A	D	E	V	L	D	L	R	G	H	L	V	I	P	G	L	V	N	T	H	H	H	M	Y	Q	S	L	T	R	A	V	P	A	A	Q	N
Template Known Secondary structure																T	T													T	T								G	G	G	S		S			S						T	T														G	G	G	G	G	S		S						T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
																											73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		A	E	L	F	G	W	L	T	N	L	Y	K	I	W	A	H	L	T	P	E	M	I	E	V	S	T	L	T	A	M	A	E	L	L	Q	S	G	C	T	T	S	S	D	H	L	Y	I	Y	P	N	G	S	R	L	D	D	S	I	G	A	A	Q	R	I	G	M	R	F	H	A	S	R	G	A	M	S	E	.	.	.
Template Known Secondary structure																T	T																			T	T	T								B					T	T														T													.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	Y	N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	I	L	R	D	T	Q	R	L	I	E	T	Y	H	D	E	G	R	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																													203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
			207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280
Predicted Secondary structure		.																																								.	.																																	.	.	.
Query SS confidence		.																																								.	.																																	.	.	.
Query Sequence		.	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	.	.	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	.	.	.	F	E	E
Query Conservation		.																																								.	.																																	.	.	.
Alig confidence		.																																								.	.																																	.	.	.
Template Conservation
Template Sequence		M	L	R	V	V	V	A	P	C	S	P	F	S	V	S	R	D	L	M	R	D	A	A	V	L	A	R	E	Y	G	V	S	L	H	T	H	L	A	E	N	V	N	D	I	A	Y	T	P	A	E	Y	A	E	D	L	G	W	V	G	H	D	V	W	H	A	H	C	V	Q	L	D	D	A	G	I	G	L	F	A	R
Template Known Secondary structure		S								S		T	T	T	S																T								S		S					T									T	T	T			S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		281	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		I	G	T	L	A	K	C	S	P	P	.	.	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P
Query Conservation												.	.
Alig confidence												.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	T	G	V	A	H	C	P	C	S	N	M	R	L	A	S	G	I	A	P	V	K	K	M	R	L	A	G	V	P	V	G	L	G	V	D	G	S	A	S	N	D	G	A	Q	M	V	A	E	V	R	Q	.	.	.	.	.	.	.	.	.	.	A	L	L	L	Q	R	V	G	F	G	P	D	A	M	T	A	R
Template Known Secondary structure			T													T	T													T										T	T	S	S												.	.	.	.	.	.	.	.	.	.											T	T	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.											.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q	Q	K	G	R	I	A	P	G	K	D	A	D	F	V	F	I	Q	P	N	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	G	R	.	.	T	I	G	A	R	I	T	K	T	I	L	R	G	D	V	I	Y	D	I	E
Query Conservation																																																												.	.
Alig confidence																																													.	.	.	.	.	.	.									.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		E	A	L	E	I	A	T	L	G	G	A	K	V	L	N	R	D	D	I	G	A	L	K	P	G	M	A	A	D	F	A	A	F	D	L	R	Q	P	L	F	A	G	A	.	.	.	.	.	.	.	L	H	D	P	V	A	A	L	V	F	C	A	P	S	Q	T	A	Y	T	V	V	N	G	K	V	V	V	R	E	G
Template Known Secondary structure								T								T		S	S	S	S	S		S	T	T	S	B								T	T	S	G	G	G	T	T		.	.	.	.	.	.	.	T	T	S								S	S					S					T	T						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.								.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F	P	V	A	P	K	G	Q	F	I	L	K	H	Q	Q
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		R	L	A	T	L	D	L	.	P	P	V	I	E	R	H	N	A
Template Known Secondary structure				S	S	S			.
Template Predicted Secondary structure									.
Template SS confidence
		454	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.