Job Description P77671 Confidence 100.00% Date Thu Jan 5 12:31:31 GMT 2012 Rank 33 Aligned Residues 367 % Identity 15% Template c2p9bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:possible prolidase; PDBTitle: crystal structure of putative prolidase from2 bifidobacterium longum Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																			.	.	.	.									.												.	.	.	.
Query SS confidence																			.	.	.	.									.												.	.	.	.
Query Sequence		M	S	F	D	L	I	I	K	N	G	T	V	I	L	E	N	E	.	.	.	.	A	R	V	V	D	I	A	V	.	K	G	G	K	I	A	A	I	G	Q	D	.	.	.	.	L	G	D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	S	H	W	E
Query Conservation																			.	.	.	.									.												.	.	.	.
Alig confidence				.															.	.	.	.									.												.	.	.	.																													.	.	.
Template Conservation				.																																																																							.	.	.
Template Sequence		V	E	.	P	F	A	L	A	H	A	T	I	V	T	G	D	K	A	G	T	I	L	R	N	X	T	I	V	V	G	A	D	G	R	I	E	Q	V	A	P	S	I	E	T	S	I	P	A	E	Y	H	Y	L	D	G	T	G	K	I	V	X	P	G	L	I	N	A	H	T	H	L	F	S	.	.	.	Y	X	A	A
Template Known Secondary structure				.														T	T													T	T	S	B							G	G	G					T	T							T	T														S			.	.	.
Template Predicted Secondary structure				.																																																																							.	.	.
Template SS confidence
		11	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	E	T	G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D	R	L	.	.	.	.	.	.	.	.	.	.	H	E	L	D	E	V	G
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	K	H	N	A	T	T	L	L	E	S	G	V	T	T	I	R	T	L	G	D	V	G	Y	E	V	V	T	L	R	D	Q	I	D	A	G	Q	I	L	G	P	R	I	L	A	S	G	P	L	X	A	I	P	E	G	H	G	A	P	L	I	A	L	T	S	G	T	P	E	E	A	R	T	A	V	A	Q	N	L
Template Known Secondary structure													T	T							S			S	S	S											T	T	S	S										S							S	S									S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	G	V	N	A	I	K	I	A	A	T	G	G	V	T	D	A	Q	E	I	Q	X	S	V	E	Q	X	R	A	I	C	D	E	A	H	Q	Y	G	V	I	V	G	A	H	A	Q	S	P	E	G	V	R	R	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		S							S			T	T	S																					T	T									S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	.	.	.	.	.	H	Y	F	V	L	D	T	D	Q	F	E	E	I	G	T	L	A	K	C	S	P	P	I	R	D	L	E	N
Query Conservation																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	D	T	I	E	H	G	S	V	L	D	D	E	L	I	G	X	F	R	H	N	P	N	A	L	R	G	Y	S	A	L	I	P	T	L	S	A	G	L	P	L	T	L	L	G	Q	D	V	T	G	I	T	D	I	Q	L	E	N	S	K	N	V	V	G	G	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		T		S																				T	T	S	T	T	S																	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q	Q
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	G	A	R	Q	A	H	E	A	G	L	X	I	G	V	G	T	D	T	G	X	T	F	V	P	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	W	R	E	L	E	L	L	V	A	Y	A	G	F	S	P	A	E	A	L	H	A	A	T	A	V	N	A	S	I	L	G	V	D	A
Template Known Secondary structure											T	T			B						T	T	S	T	T	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T							T	T		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
			377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	G	R	I	A	P	G	K	D	A	D	F	V	F	I	Q	P	N	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	G	R	T	I	G	A	R	I	T	K	T	I	L	R	G	D	V	I	Y	D	I	E	Q	G	F
Query Conservation		.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	G	S	L	E	V	G	K	S	A	D	L	L	V	L	N	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	D	D	L	R	A	L	E	H	P	A	L	V	I	A	A	G	H	P	V	W	R	P	G	P	K	R
Template Known Secondary structure		T	S	S	S			T	T	S	B							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		G	G	G	G	T	S		S					T	T					S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.																		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.