Job Description P77671 Confidence 100.00% Date Thu Jan 5 12:31:31 GMT 2012 Rank 10 Aligned Residues 451 % Identity 27% Template c2fvmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidinase; PDBTitle: crystal structure of dihydropyrimidinase from saccharomyces kluyveri2 in complex with the reaction product n-carbamyl-beta-alanine Resolution 2.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.
Predicted Secondary structure																																						.	.																																.	.	.
Query SS confidence																																						.	.																																.	.	.
Query Sequence		M	S	F	D	L	I	I	K	N	G	T	V	I	L	E	N	E	A	R	V	V	D	I	A	V	K	G	G	K	I	A	A	I	G	Q	D	.	.	L	G	D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	G	R	.	.	.	S	H	W	E	G	Y	E	T
Query Conservation																																						.	.																																.	.	.
Alig confidence				.																																		.	.																																.	.	.
Template Conservation				.
Template Sequence		I	Y	.	D	L	I	I	K	N	G	I	I	C	T	A	S	D	I	Y	A	A	E	I	A	V	N	N	G	K	V	Q	L	I	A	A	S	I	D	P	S	L	G	S	E	V	I	D	A	E	G	A	F	I	T	P	G	G	I	D	A	H	V	H	V	D	E	P	L	K	L	L	G	D	V	V	D	T	M	E	H
Template Known Secondary structure				.						S						S	S											T	T							S				G	G	G								T	T												B					T	T		T	T	S			S
Template Predicted Secondary structure				.
Template SS confidence
		3	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		G	T	R	A	A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	.	.	.	.	.	.	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	R	S	A	V	A	G	G	T	T	T	V	V	A	F	S	T	Q	D	V	S	K	K	G	P	S	A	L	A	E	S	V	K	L	D	V	D	E	Y	S	E	Q	T	L	Y	C	D	Y	G	L	H	L	I	L	F	Q	I	E	K	P	S	V	E	A	R	E	L	L	D	V	Q	L	Q	A	A	Y	N	D	Y
Template Known Secondary structure									T	T												T	T			S	T	T														T	T	S			S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	C	G	D	R	G	I	D	N	D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	S	S	V	M	F	M	T	Y	P	G	L	Q	I	S	D	Y	D	I	M	S	A	M	Y	A	T	R	K	N	G	F	T	T	M	L	H	A	E	N	G	D	M	V	K	W	M	I	E	A	L	E	E	Q	G	L	T	D	A	Y	Y	H	G	V	S	R	P	S	I	V	E	G	E	A	T	N	R	A	I	T
Template Known Secondary structure					B			B	S	S	S	T	T	T	B																T	T		B				B																	T	T			S	T	T					T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																							.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	K	V	A	G	C	R	L	H	V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	G	T	L	A	K	C
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	T	T	M	D	T	P	I	L	F	V	H	V	S	S	P	Q	A	A	E	V	I	K	Q	A	Q	T	K	G	L	K	V	Y	A	E	T	C	P	Q	Y	A	L	L	S	D	A	I	T	R	C	H	G	V	G	I	D	L	S	S	I	S	E	S	P	F	T	N	P	D	D	R	F	I	G	S	K	Y	I	C
Template Known Secondary structure						T	T							S																	T																G	G	G	G	S					S			G	G	G		S	S	S	T	T	T		T	T		T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S	D	H	S	P	C	P	P	E	M	K	A	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	P	I	R	P	E	G	T	Q	K	S	I	W	K	G	M	N	N	G	T	F	T	I	V	G	S	D	H	C	S	Y	N	Y	Y	E	K	T	S	T	A	S	K	H	R	A	F	D	P	E	N	N	K	N	G	E	F	R	Y	I	P	N	G	L	P	G	V	C	T	R	M	P	L	L	Y	D	Y	G	Y	L
Template Known Secondary structure		S	S					T	T												T	S		S						B				B	S	S			S	S	T	T	B	G	G	G	G			G	G	G	T			S		G	G	G	S				B			T	T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		352	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.									.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure					.																							.										.										.	.	.	.	.	.	.	.
Query SS confidence					.																							.										.										.	.	.	.	.	.	.	.
Query Sequence		K	R	G	.	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q	Q	.	K	G	R	I	A	P	G	K	D	.	A	D	F	V	F	I	Q	P	N	.	.	.	.	.	.	.	.	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	G	R	T	I	G	A
Query Conservation					.																							.										.										.	.	.	.	.	.	.	.
Alig confidence					.																							.										.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	N	L	T	S	M	M	K	L	V	E	I	Q	C	T	N	P	A	K	V	Y	G	M	Y	P	Q	K	G	S	I	L	P	G	V	S	D	A	D	L	V	I	W	Y	P	D	D	S	K	K	E	Y	N	S	K	P	K	L	I	T	N	K	L	M	E	H	N	C	D	Y	T	P	F	E	G	I	E	I	K	N
Template Known Secondary structure		T	T	S	S	S										T							T	T		T	T	T	S	S	S			T	T	T	S	B									T	T			S			T	T	S		S	B			S	G	G	G		S	S		S			T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	T	K	T	I	L	R	G	D	V	I	Y	D	I	E	Q	G	F	P	V	A	P	K	G	Q	F	I	L	K	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	P	R	Y	T	I	V	K	G	K	I	V	Y	K	E	G	E	I	L	K	E	N	A	D	G	K	Y	L	K	R	G	K
Template Known Secondary structure				S					T	T						T	T				G	G	G					B
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.