Job Description P77671 Confidence 100.00% Date Thu Jan 5 12:31:31 GMT 2012 Rank 3 Aligned Residues 443 % Identity 22% Template c2ftwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidine amidohydrolase; PDBTitle: crystal structure of dihydropyrimidinase from dictyostelium discoideum Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																														.	.
Query SS confidence																																			.	.																														.	.
Query Sequence		D	L	I	I	K	N	G	T	V	I	L	E	N	E	A	R	V	V	D	I	A	V	K	G	G	K	I	A	A	I	G	Q	D	.	.	L	G	D	A	K	E	V	M	D	A	S	G	L	V	V	S	P	G	M	V	D	A	H	T	H	I	S	E	P	.	.	G	R	S	H	W	E	G	Y	E	T	G	T	R	A
Query Conservation																																			.	.																														.	.
Alig confidence																																			.	.																														.	.
Template Conservation
Template Sequence		T	I	L	I	K	N	G	T	V	V	N	D	D	R	Y	F	K	S	D	V	L	V	E	N	G	I	I	K	E	I	S	K	N	I	E	P	K	E	G	I	K	V	V	D	A	T	D	K	L	L	L	P	G	G	I	D	T	H	T	H	F	Q	L	P	F	M	G	T	V	S	V	D	D	F	D	I	G	T	Q	A
Template Known Secondary structure							S						S	S											T	T							S						S	S							T	T														T	T				T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	G	G	I	T	T	M	I	E	M	P	L	N	Q	L	P	A	T	V	D	R	A	S	I	E	L	K	F	D	A	A	K	G	K	L	T	I	D	A	A	Q	L	G	G	L	V	S	Y	N	I	D	R	L	H	E	L	D	E	V	G	V	V	G	F	K	C	F	V	A	T	C	G	D	R	G	I	D	N
Query Conservation
Alig confidence																				.																																															.	.	.	.
Template Conservation																				.																																															.	.	.	.
Template Sequence		A	V	A	G	G	T	T	F	I	I	D	F	V	I	P	T	R	G	.	Q	S	L	L	E	A	Y	D	Q	W	K	K	W	A	D	E	K	V	N	C	D	Y	S	L	H	V	A	I	T	W	W	S	E	Q	V	S	R	E	M	E	I	L	V	K	E	R	.	.	.	.	G	V	N	S	F	C	F	M	A	Y	K
Template Known Secondary structure					T	T												T	T	.																T	T		S	S										S																S	.	.	.	.				B			B	S	S		T
Template Predicted Secondary structure																				.																																															.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	R	D	V	N	D	W	Q	F	F	K	G	A	Q	K	L	G	E	L	G	Q	P	V	L	V	H	C	E	N	A	L	I	C	D	E	L	G	E	E	A	K	R	E	G	R	V	T	A	H	D	Y	V	A	S	R	P	V	F	T	E	V	E	A	I	R	R	V	L	Y	L	A	K	V	A	G	C	R	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	F	M	V	T	D	Q	E	M	Y	H	I	F	K	R	C	K	E	L	G	A	I	A	Q	V	H	A	E	N	G	D	M	V	F	E	G	Q	K	K	M	L	E	M	G	I	T	G	P	E	G	H	E	L	S	R	P	E	A	L	E	A	E	A	T	N	R	A	I	V	I	A	D	S	V	C	T	P	V	Y
Template Known Secondary structure		T	T	T	B																	T		B				B		S															T	T			S	T							S		T																		T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		V	C	H	V	S	S	P	E	G	V	E	E	V	T	R	A	R	Q	E	G	Q	D	V	T	C	E	S	C	P	H	Y	F	V	L	D	T	D	Q	F	E	E	I	G	.	.	.	.	.	T	L	A	K	C	S	P	P	I	R	D	L	E	N	Q	K	G	M	W	E	K	L	F	N	G	E	I	D	C	L	V	S
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.
Template Conservation
Template Sequence		I	V	H	V	Q	S	I	G	A	A	D	V	I	C	K	H	R	K	E	G	V	R	V	Y	G	E	P	I	A	A	G	L	G	V	D	G	S	H	M	W	N	H	D	W	R	H	A	A	A	F	V	M	G	P	P	I	R	P	D	P	R	T	K	G	V	L	M	D	Y	L	A	R	G	D	L	D	C	V	G	T
Template Known Secondary structure				S																T	T								B								G	G	G	G	G		S	S						T	T			S	S						T	T												T	S	S				B
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		315	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure									.	.	.																																																								.
Query SS confidence									.	.	.																																																								.
Query Sequence		D	H	S	P	C	P	P	.	.	.	E	M	K	A	G	N	I	M	K	A	W	G	G	I	A	G	L	Q	S	C	M	D	V	M	F	D	E	A	V	Q	K	R	G	M	S	L	P	M	F	G	K	L	M	A	T	N	A	A	D	I	F	G	L	Q	Q	.	K	G	R	I	A	P	G	K	D	A	D	F	V	F
Query Conservation									.	.	.																																																								.
Alig confidence									.	.	.																																																								.
Template Conservation
Template Sequence		D	N	C	T	F	C	A	D	Q	K	A	M	G	K	D	D	F	T	K	I	P	N	G	V	N	G	V	E	D	R	M	S	I	V	W	E	N	G	V	N	T	G	K	L	T	W	C	Q	F	V	R	A	T	S	S	E	R	A	R	I	F	N	I	Y	P	R	K	G	R	I	D	V	G	C	D	G	D	I	V	I
Template Known Secondary structure			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S			S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	P	N	S	S	Y	V	L	T	N	D	D	L	E	Y	R	H	K	V	S	P	Y	V	G	R	T	I	G	A	R	I	T	K	T	I	L	R	G	D	V	I	Y	D	I	E	Q	G	F	P	V	A	P	K	G	Q	F	I	L	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	D	P	N	Q	S	K	T	I	S	K	D	T	H	H	H	A	V	D	F	N	I	F	E	G	I	K	V	T	G	I	A	V	T	T	I	V	A	G	N	I	V	W	S	D	N	K	L	S	C	V	K	G	S	G	R	F	V	P	R	P
Template Known Secondary structure												T	T	T				S	S	S			T	T	T	T													T	T						T	T						T	T				B
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.