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Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank7Aligned Residues444
% Identity29%Templatec1nfgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:d-hydantoinase; PDBTitle: structure of d-hydantoinase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60........ .70.........80
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Query Sequence  FDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRS. . HWEGYETGTRAA
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Template Sequence  MDIIIKNGTIVTADGISRADLGIKDGKITQIGGALGPAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVAA
Template Known Secondary structure 

TTTTSS




S
TT



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TT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDND
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Template Sequence  ACGGTTTIVDFCQ. QDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFVFM. . . . . AYRG
Template Known Secondary structure  TT.

TTS
TTT
SS
SS

TTTGGGGT

B

BS.....SSTT
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   81........90... ......100.........110.........120.........130.........140.........150 ....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  FRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHV
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Template Sequence  MNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYI
Template Known Secondary structure  TTB

T
BB


TT

STTS
T

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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   241........250.........260.........270....... ..280.........290.........300.........310.......
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Query Sequence  CHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQ. . . FEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHS
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Template Sequence  VHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHC
Template Known Secondary structure 



ST


GGGGT

GGGGG
TTTGGGGG

SS



TT

S


B
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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   318.320.........330.........340. ........350.........360.........370...... ...380.........390...
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Query Sequence  PCPPEMKAGNIMKAWGGIAGLQSC. . . MDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQ. KGRIAPGKDADFVFIQP
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Template Sequence  SWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDADIVLWDP
Template Known Secondary structure 


TTTTTTTTTT
GGGS


B

TTTTTSS
TTT
TTTSSS
STTSB

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   316...320.........330.........340.........350.........360.........370.........380.........390.....
 
   394.....400.........410.........420.........430.........440.........450..
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Query Sequence  NSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQ
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Template Conservation 
                           
  
 
 
  
   
        
  
    
Template Sequence  EAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKRRK
Template Known Secondary structure 

GGGS
SS
S

TTTT
TTTT


TTS

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S
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   396...400.........410.........420.........430.........440.........450....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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