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Job DescriptionP77671
Confidence100.00%DateThu Jan 5 12:31:31 GMT 2012
Rank9Aligned Residues446
% Identity31%Templatec1k1dF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:d-hydantoinase; PDBTitle: crystal structure of d-hydantoinase
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60...... ...70.........
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Query Sequence  FDLIIKNGTVILENEARVVDIAVKGGKIAAIGQD. LGDAKEVMDASGLVVSPGMVDAHTHISEPG. . RSHWEGYETGTRA
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Template Sequence  MTKIIKNGTIVTATDTYEAHLLIKDGKIAMIGQNLEEKGAEVIDAKGCYVFPGGIDPHTHLDMPLGGTVTKDDFESGTIA
Template Known Secondary structure 


SS

SSBSS


SS



TT


SS


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SS
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  AAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDN
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Template Sequence  AAFGGTTTIIDFCLTNKGEPLKKAI. ETWHNKANGKAVIDYGFHLMISEITDDVLEELPKVLEEEGITSLVFMAY. . . . K
Template Known Secondary structure  TT


TTS
.TTT
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S


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BSSS....T
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   81........90.........100..... ....110.........120.........130.........140.........150.... .
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  DFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLH
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Template Sequence  NVFQADDGTLYCTLLAAKELGALVMVHAENGDVIDYLTKKALADGNTDPIYHALTRPPELEGEATGRACQLTELAGSQLY
Template Known Secondary structure  TTTB

T
BB


TT

STTS
T
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   240.........250.........260.........270....... ..280.........290.........300.........310......
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Query Sequence  VCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQ. . . FEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDH
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Template Sequence  VVHVTCAQAVEKIAEARNKGLDVWGETCPQYLVLDQSYLEKPNFEGAKYVWSPPLREKWHQEVLWNALKNGQLQTLGSDQ
Template Known Secondary structure 
S

STT



GGGGTSSTTGGGGG

SS



TTTSS



B
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   317..320...... ...330.........340.........350.........360.........370...... ...380.........390.
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Query Sequence  SPCPPEMKAG. . . . NIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQ. KGRIAPGKDADFVFI
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Template Sequence  CSFDFKGQKELGRGDFTKIPNGGPIIEDRVSILFSEGVKKGRITLNQFVDIVSTRIAKLFGLFPKKGTIVVGSDADLVIF
Template Known Secondary structure 



TTTTGGGGSS
GGGS


B

TTTTGGGTSS
TTT
TTTSS

STTSB

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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   392.......400.........410.........420.........430.........440.........450...
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Query Sequence  QPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
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Template Conservation 
 
                           
  
 
 
  
   
        
  
 
   
Template Sequence  DPNIERVISAETHHMAVDYNAFEGMKVTGEPVSVLCRGEFVVRDKQFVGKPGYGQYLKRAKY
Template Known Secondary structure 

TTT

SSSS

TTTT
TTTT


TT
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S
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   397..400.........410.........420.........430.........440.........450........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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