Job Description P11290 Confidence 94.02% Date Wed Jan 25 15:20:38 GMT 2012 Rank 30 Aligned Residues 196 % Identity 12% Template d1vica_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	S	T	N	K	L	S	V	I	I	P	L	Y	N	A	G	D	D	F	R	T	C	M	E	S	L	I	T	Q	T	W	T	A	L	E	I	I	I	I	N	D	G	S	T	D	N	S	V	E	I	A	K	Y	Y	A	E	N	Y	P	H	V	R	L	L	H	Q	A	N	A	G	A	S	V	A	R	N	R	G	I
Query Conservation
Alig confidence											.	.	.	.	.																		.	.											.	.	.	.	.
Template Conservation											.	.	.	.	.																		.	.											.	.	.	.	.
Template Sequence		L	P	G	K	P	L	A	D	I	.	.	.	.	.	K	G	K	P	M	I	Q	H	V	F	E	K	A	L	Q	S	G	.	.	A	S	R	V	I	I	A	T	D	N	.	.	.	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	M	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V
Template Known Secondary structure		S	T	T	G	G	G				.	.	.	.	.	T	T														T	T	.	.		S							S		.	.	.	.	.										T	T									S	S
Template Predicted Secondary structure											.	.	.	.	.																		.	.											.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
					82	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.															.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.																.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	V	A	T	G	K	Y	V	A	F	V	D	A	D	D	.	E	V	Y	P	T	M	Y	E	T	L	M	T	M	A	L	E	D	D	L	D	V	A	Q	C	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	C	F	R	E	T	G	E	T	W	Q	S	I	P	T	D	R	L	R	S
Query Conservation		.	.	.																.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	L	A	I	P	D	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	M	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D
Template Known Secondary structure				T	T			T	T								T	T		T	T																	T		S															T		T	T	S							T	T	S	B						S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	L	T	G	P	D	W	L	R	M	G	L	S	S	R	R	W	T	H	V	V	W	M	G	V	Y	R	R	D	V	I	V	K	N	N	I	K	F	I	A	G	L	H	H	Q	D	I	V	W	T	T	E	F	M	F	N	A	L	R	A	R	Y	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	Q	F	M	N	L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	R	V	L	Y	N	G	E	R	I	H	V	E	L
Template Known Secondary structure						T	T		S		G	G	G					T	T																					S										T		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions