Job Description P11290 Confidence 97.13% Date Wed Jan 25 15:20:38 GMT 2012 Rank 18 Aligned Residues 188 % Identity 13% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																							.																								.	.	.
Query SS confidence																																																							.																								.	.	.
Query Sequence		S	V	I	I	P	L	Y	N	A	G	D	D	F	R	T	C	M	E	S	L	I	T	Q	T	W	T	A	L	E	I	I	I	I	N	D	G	S	T	D	N	S	V	E	I	A	K	Y	Y	A	E	N	Y	P	.	H	V	R	L	L	H	Q	A	N	A	G	A	S	V	A	R	N	R	G	I	E	V	A	.	.	.
Query Conservation																																																							.																								.	.	.
Alig confidence						.	.	.																						.							.	.	.	.	.	.	.												.																								.	.	.
Template Conservation						.	.	.																						.							.	.	.	.	.	.	.
Template Sequence		T	V	I	I	.	.	.	P	A	R	P	X	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	R	V	.	I	I	A	T	D	N	.	.	.	.	.	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P
Template Known Secondary structure						.	.	.																T	T		S			.					S		.	.	.	.	.	.	.										T	T								S			S	S												T	T
Template Predicted Secondary structure						.	.	.																						.							.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		85	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.															.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	K	Y	V	A	F	V	D	A	D	D	.	E	V	Y	P	T	M	Y	E	T	L	M	T	M	A	L	E	D	D	L	D	V	A	Q	C	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	C	F	R	E	T	G	E	T	W	Q	S	I	P	T	D	R	L	R	S	T	G	V	L	T	G
Query Conservation														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X	N
Template Known Secondary structure		T	T	S							T	T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		P	D	W	L	R	M	G	L	S	S	R	R	W	T	H	V	V	W	M	G	V	Y	R	R	D	V	I	V	K	N	N	I	K	F	I	A	G	L	.	H	H	Q	D	I	V	W	T	T	E	F	M	F	N	A	L	R	A	R	Y	T
Query Conservation																																								.
Alig confidence																																								.									.
Template Conservation																																																	.
Template Sequence		L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	L	.	R	V	L	Y	N	G	E	R	I	H	V	E
Template Known Secondary structure					T	T	T					S																						S										T		T	T		.					T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions