 |
Job Description | P11290 | Confidence | 76.85% | Date | Wed Jan 25 15:20:38 GMT 2012 |
Rank | 59 | Aligned Residues | 101 |
% Identity | 10% | Template | c3rsbB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:adenosylcobinamide-phosphate guanylyltransferase; |
PDBTitle: structure of the archaeal gtp:adocbi-p guanylyltransferase (coby) from2 methanocaldococcus jannaschii
|
Resolution | 2.80 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | S | T | N | K | L | S | V | I | I | P | L | Y | N | A | G | D | D | F | R | T | C | M | E | S | L | I | T | Q | T | W | T | A | L | E | I | I | I | I | N | D | G | S | T | D | N | S | V | E | I | A | K | Y | Y | A | E | N | Y | P | H | V | R | L | L | H | Q | A | N | A | G | A | S | V | A | R | N | R | G | I |
Query Conservation |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |   |
| . | . | . |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   | . | . |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
X | G | G | V | E | K | P | L | I | K | L | . |
. |
. |
C | G | R | C | L | I | D | Y | V | V | S | P | L | L | K | S | K | V | N | . |
. |
N | I | F | I | A | T | S | P | N | T | P | K | T | K | E | Y | I | N | S | A | Y | K | D | Y | K | . |
. |
. |
. |
. |
. |
N | I | V | V | I | D | T | E | D | L | N | E | C | I |
Template Known Secondary structure |   |
G | T | S |
|
| G | G | G |
|  |  | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
| . | . |
|  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | S | S | S | S | . | . | . | . | . | . |  |  |  |  |  |
|
|
| T | T |
|
|
| G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | A | T | G | K | Y | V | A | F | V | D | A | D | D | E | V | Y | P | T | M | Y | E | T | L | M | T | M | A | L | E | D |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
G | Y | F | S | E | P | F | L | V | V | S | S | D | L | I | N | L | K | S | K | I | I | N | S | I | V | D | Y | F | Y | C | I |
Template Known Secondary structure |   |
G | G |
| S | S |
|  |  |  |  |  | S |
|  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|