Job Description P11290 Confidence 100.00% Date Wed Jan 25 15:20:38 GMT 2012 Rank 1 Aligned Residues 219 % Identity 21% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	N	S	T	N	K	L	S	V	I	I	P	L	Y	N	A	G	D	D	F	R	T	C	M	E	S	L	I	T	Q	T	W	T	A	L	E	I	I	I	I	N	D	G	S	T	D	N	S	V	E	I	A	K	Y	Y	A	E	N	Y	P	H	V	R	L	L	H	Q	A	N	A	G	A	S	V	A	R	N	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	K	R	V	P	L	V	S	I	Y	I	P	A	Y	N	C	S	K	Y	I	V	R	C	V	E	S	A	L	N	Q	T	I	T	D	L	E	V	C	I	C	D	D	G	S	T	D	D	T	L	R	I	L	Q	E	H	Y	A	N	H	P	R	V	R	F	I	S	Q	K	N	K	G	I	G	S	A	S	N	T	A
Template Known Secondary structure					S	S		S								S	S		T	T	T										S		S			S									S		S	S	T										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	E	V	A	T	G	K	Y	V	A	F	V	D	A	D	D	E	V	Y	P	T	M	Y	E	T	L	M	T	M	A	L	E	D	.	D	L	D	V	A	Q	C	N	A	D	W	C	F	R	E	T	G	E	T	W	Q	S	I	P	T	D	R	L	R	S	T	G	V	L	T	G	P	D	W	L	R	M	G	L	S	S
Query Conservation																																			.
Alig confidence																																			.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	L	C	R	G	F	Y	I	G	Q	L	D	S	D	D	F	L	E	P	D	A	V	E	L	C	L	D	E	F	R	K	D	L	S	L	A	C	V	Y	T	T	N	R	N	I	D	R	E	G	N	L	I	S	N	G	Y	N	W	P	I	Y	S	R	E	K	L	T	S	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S							T	T					T	T													T	T													T	T	S										S	S									S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	W	T	H	V	V	W	M	G	V	Y	R	R	D	V	I	V	K	N	N	I	K	F	I	A	G	L	H	H	Q	D	I	V	W	T	T	E	F	M	F	N	A	L	R	A	R	Y	T	E	Q	S	L	Y	K	Y	Y	L	H	N	T	S	V	S	R	L	H	R	Q	G	N	K	N	L
Query Conservation
Alig confidence		.	.	.																																									.
Template Conservation		.	.	.																																									.
Template Sequence		.	.	.	M	I	C	H	H	F	R	M	F	T	A	R	A	W	N	L	T	E	G	F	N	E	S	I	S	N	A	V	D	Y	D	M	Y	L	K	L	S	E	V	G	.	P	F	K	H	I	N	K	I	C	Y	N	R	V	L	H	D	I	Q	K	E	N	H	F	K	V	V	N	E	S	L
Template Known Secondary structure		.	.	.					S											T	T	T		S		S	S		S	S	S										T	T	T	S	.
Template Predicted Secondary structure		.	.	.																																									.
Template SS confidence
					577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions