Job Description P11290 Confidence 99.83% Date Wed Jan 25 15:20:38 GMT 2012 Rank 12 Aligned Residues 201 % Identity 15% Template c2qgiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:atp synthase subunits region orf 6; PDBTitle: the udp complex structure of the sixth gene product of the f1-atpase2 operon of rhodobacter blasticus Resolution 1.65 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		I	P	L	Y	N	A	G	D	D	F	R	T	C	M	E	S	L	I	T	Q	T	W	T	A	L	E	I	I	I	I	N	D	G	S	T	D	N	S	V	E	I	A	K	Y	Y	A	E	N	Y	P	H	V	R	L	L	.	.	.	.	.	H	Q	A	N	A	G	A	S	V	A	R	N	R	G	I	E	V	A	T	G
Query Conservation																																																									.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		V	P	T	Y	V	Q	D	K	D	E	S	T	L	M	F	S	V	C	.	.	.	.	.	.	.	.	S	L	V	R	D	Q	A	K	Y	D	R	L	L	E	S	F	E	R	F	G	F	T	P	D	K	A	E	F	L	A	A	D	N	R	E	G	N	Q	F	H	G	F	S	W	H	K	Q	M	L	P	R	C	K	G
Template Known Secondary structure								S							S					.	.	.	.	.	.	.	.				S															T	T			T	T	T									S	S	S		S	S		T	T	T						G	G	G			S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	V	A	F	V	D	A	D	D	E	V	Y	P	T	M	Y	E	T	L	M	T	M	A	L	E	D	D	L	D	V	A	Q	C	N	A	D	W	C	F	R	E	T	G	E	T	W	Q	S	I	P	T	D	R	L	R	S	T	G	V	L	T	G	P	D	W	L	R	M	G	L	S	S	R	R	W	T	H	V	V
Query Conservation
Alig confidence																																																																																.
Template Conservation																																																																																.
Template Sequence		R	Y	V	I	F	C	H	E	D	V	E	L	V	D	R	G	Y	D	D	L	V	A	A	I	E	A	L	E	E	A	D	P	K	W	L	V	A	G	V	A	G	S	P	W	R	P	L	N	H	S	V	T	A	Q	A	L	H	I	S	D	V	F	G	N	D	R	R	R	G	N	V	P	C	R	V	E	S	L	.	D
Template Known Secondary structure		S							T	T				S	S																		T	T						S					S	S		S		T	T	S										T	T							S		S	S							.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	G	V	Y	R	R	D	V	I	V	K	N	N	I	K	F	I	A	G	L	H	H	Q	D	I	V	W	T	T	E	F	M	F	N	A	L	R	A	R	Y	T	E	Q	S	L	Y	K	Y	Y	L	H	N	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	F	L	L	M	R	R	L	K	P	V	L	N	S	Y	D	M	Q	G	F	H	Y	Y	G	A	D	L	C	L	Q	A	E	F	L	G	G	R	A	Y	A	I	D	F	H	L	H	H	Y	G	R	A	I	A	D
Template Known Secondary structure		T	T						T	T	B						S	S			S	S	S	S												T	T																			S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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