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Job DescriptionP11290
Confidence100.00%DateWed Jan 25 15:20:38 GMT 2012
Rank2Aligned Residues251
% Identity14%Templatec2d7iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20.........30...... ...40.........50 .........60....... ..70.......
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Query Sequence  NSTNKLSVIIPLYNAG. DDFRTCMESLITQTWTAL. . EIIIINDGSTDNSV. EIAKYYAENYPHVRLLH. QANAGASVAR
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Template Sequence  ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTR
Template Known Secondary structure  SS


SS

S
GGG
S


GGGTTTSTT
SS


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   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   78.80.........90.........100.........110.........120.........130.........140 ........
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Query Sequence  NRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQCNADWCFRETGETWQSIPTDR. . . . . . . . . LRSTGVLT
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Template Sequence  MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPP
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SS

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TT
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TT
TTT



TTSS

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T
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   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   149150.........160.........170.........180........ .190.........200.........210.........220......
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Query Sequence  GPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNNIKFIAGLH. . HQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLH
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Template Sequence  ELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVP
Template Known Secondary structure  TT

SSTTS

SS

SSSTTSS
TT

SSSSTT



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   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   227..230.........240.........250...
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Query Sequence  RQGNKNLNYQRHYIKITRLLEKLNRNY
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Template Sequence  AGVSLARNLKRVAEVWMDEYAEYIYQR
Template Known Secondary structure  SS


GGGTT
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   382.......390.........400........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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