 |
Job Description | P0AAK1 | Confidence | 2.63% | Date | Thu Jan 5 11:13:08 GMT 2012 |
Rank | 100 | Aligned Residues | 29 |
% Identity | 21% | Template | c2fugA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; |
PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
|
Resolution | 3.30 Å |
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | A | I | T | R | V | D | G | A | V | Q | L | N | E | S | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | V | S | C | K | L | C | G | I | A | C | P |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
K | G | S | M | L | G | T | G | G | V | I | L | I | P | E | R | V | S | M | V | D | A | M | W | N | L | T | R | F | Y | A | H | E | S | C | G | K | C | T | P | C | R | E | G | V | A |
Template Known Secondary structure |   |
T | S | S |
|
| S | T | T |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|