Return to main results Retrieve Phyre Job Id

Job DescriptionP77779
Confidence9.34%DateThu Jan 5 12:32:45 GMT 2012
Rank18Aligned Residues30
% Identity40%Templatec3nfvA_
PDB info PDB header:lyaseChain: A: PDB Molecule:alginate lyase; PDBTitle: crystal structure of an alginate lyase (bacova_01668) from bacteroides2 ovatus at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   422.......430.... .....440.........450.
Predicted Secondary structure 












.....














Query SS confidence 












. . . . .
















Query Sequence  PQTNWPTTQLPPG. . . . . YTCAEPYLFPDINKPDG
Query Conservation               .....                 
Alig confidence 












.....
















Template Conservation 
 

  
     


 


 
  

 


    

Template Sequence  PPSVXDKTXTADSGDKHDYXSXGPYWWPDPSKPDG
Template Known Secondary structure 


GGGSSS

TTS
TTS

TT

TTSTT
Template Predicted Secondary structure 
































Template SS confidence 


































   63......70.........80.........90.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions