Return to main results Retrieve Phyre Job Id

Job DescriptionP75836
Confidence56.23%DateThu Jan 5 12:14:51 GMT 2012
Rank276Aligned Residues43
% Identity23%Templated1s7oa_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like
Resolution2.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10........ .20.........30.........40.....
Predicted Secondary structure 


.



Query SS confidence 















.


























Query Sequence  MNMSDFATFFAVARNQ. SFRAAGDELGLSSSAISHSIKTLEQRL
Query Conservation 
 
  
  
  

  
.
 
 

  
 






  
  

  
Alig confidence 















.


























Template Conservation 
   

 

 
     

  


  



  

   
 

 
 
Template Sequence  LTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKIL
Template Known Secondary structure  S
T


T

Template Predicted Secondary structure 








Template SS confidence 











































   23......30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions