Return to main results Retrieve Phyre Job Id

Job DescriptionP75836
Confidence89.71%DateThu Jan 5 12:14:51 GMT 2012
Rank187Aligned Residues62
% Identity15%Templated1pdnc_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11....... .20.........30.........40.........50. ........60.........70..
Predicted Secondary structure 
.





.




Query SS confidence 







.
































.




















Query Sequence  FFAVARNQ. SFRAAGDELGLSSSAISHSIKTLEQRLKIRLFN. RTTRSVSLTEAGSNLYERLRP
Query Conservation 
  

  
.
 
 

  
 






  
  

  

  

 .
      

  
  
   
  
Alig confidence 







.
































.




















Template Conservation 

 
   
 
   

  
 

  

 
 
 
    
          


  
      
  
  
Template Sequence  IVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKR
Template Known Secondary structure  TT

T



SS



S




SS
STTTT
Template Predicted Secondary structure 

























Template SS confidence 































































   26...30.........40.........50.........60.........70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions