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Job DescriptionP75836
Confidence99.73%DateThu Jan 5 12:14:51 GMT 2012
Rank28Aligned Residues201
% Identity10%Templatec3n6uA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GTLKINAARVAARIFLMSLLVGFTREYPDIKVELTTDDSL. . . VDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAA
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Template Sequence  GHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIV
Template Known Secondary structure 

T
TT


TTTTTTS
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GGGS
TT

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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
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Query Sequence  TPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAV. AGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYL
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Template Conservation                                                                                  
Template Sequence  GQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNA
Template Known Secondary structure  TT
TTTT

SGGGGTTS

TTSTTTT





TTTTSS
BSST
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   249250.........260.........270.........280.........290...
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Query Sequence  DTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQI
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Template Sequence  FKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL
Template Known Secondary structure  TGGG



S




TTS


T
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   252.......260.........270.........280.........290......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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