Return to main results Retrieve Phyre Job Id

Job DescriptionP21507
Confidence99.68%DateWed Jan 25 15:20:41 GMT 2012
Rank113Aligned Residues180
% Identity18%Templated1gm5a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40 .........50.........60.........70.........80.
Predicted Secondary structure 











......













Query SS confidence 
































. . . . . .








































Query Sequence  ELELDESLLEALQDKGFTRPTAIQAAAIPPALD. . . . . . GRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILI
Query Conservation   
 
   
   
   
      

  

  

 ......
  


 








   



  
             

Alig confidence 
































......






























.......


Template Conservation                 
 
 
   
  

  
            

   

 


 

             .......   
Template Sequence  PKKIEGKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQ. . . . . . . TAF
Template Known Secondary structure 




TSSS


SSS





SSSSTS
.......
Template Predicted Secondary structure 
























.......

Template SS confidence 















































































   350.........360.........370.........380.........390.........400.........410......... 420..
 
   82.......90.........100.........110.........120... ......130.........140.........150.......
Predicted Secondary structure 









....












Query SS confidence 









































. . . .

































Query Sequence  LTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVF. . . . SENQDIVVATTGRLLQYIKEENFDCRAVETLILD
Query Conservation 
 

  
  
                                ....     
 
                          
Alig confidence 









































....

















.....










Template Conservation 


   
  
                                         


 
   
    .....      




Template Sequence  MVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDV. . . . . HFKNLGLVIID
Template Known Secondary structure 
S
T
SS



SSS
SS



TT

.....

S


Template Predicted Secondary structure 





















.....





Template SS confidence 















































































   423......430.........440.........450.........460.........470.........480...... ...490.......
 
   158.160.........170.........180.........190.........200.........210
Predicted Secondary structure 






















Query SS confidence 




















































Query Sequence  EADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEV
Query Conservation                                           
           
Alig confidence 





...........



































Template Conservation 



  ...........           
 





  

     
      
Template Sequence  EQHRFE. . . . . . . . . . . ALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVI
Template Known Secondary structure  S




...........


SSSS


SS


T

SS
Template Predicted Secondary structure 
...........










Template SS confidence 




















































   498.500... ......510.........520.........530.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions