Job Description P21507 Confidence 100.00% Date Wed Jan 25 15:20:41 GMT 2012 Rank 30 Aligned Residues 293 % Identity 15% Template c3rc8A_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial; PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment Resolution 2.90 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	I	Q	A	A	A	I	P	P	A	L	D	G	R	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A	L	Q	H	L	L	D	F	P	R	K	K	S	G	P	P	R	I	L	I	L	T	P	T	R	E	L	A	M	Q	V	S	D	H	A	R	E	L	A	K	H	T	H	L	D	I
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		I	P	P	N	W	Y	P	D	A	R	A	M	Q	R	K	I	I	F	H	S	G	P	T	N	S	G	K	T	Y	H	A	I	Q	K	Y	F	S	.	.	.	.	.	.	.	.	.	.	.	A	K	S	G	V	Y	C	G	P	L	K	L	L	A	H	E	I	F	E	K	S	N	A	A	G	.	.	.	.	V	P	C
Template Known Secondary structure			G	G	G	G						T	S										S	S	S	S	S	T	T										.	.	.	.	.	.	.	.	.	.	.	S	S	S						S	S														T	T	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	T	G	G	V	A	Y	M	N	H	A	E	V	F	S	E	N	Q	D	I	V	V	A	T	T	G	R	L	L	Q	Y	I	K	E	E	N	F	D	C	R	A	V	E	T	L	I	L	D	E	A	D	R	M	L	D	M	G	F	A	Q	D	I	E	H	I	A	G	E	T	R	W	R	K	Q	T	L	L	F
Query Conservation
Alig confidence																.	.															.	.	.	.	.	.	.	.
Template Conservation																.	.															.	.	.	.	.	.	.	.
Template Sequence		D	L	V	T	G	E	E	R	V	T	V	Q	P	N	.	.	G	K	Q	A	S	H	V	S	C	T	V	E	M	C	.	.	.	.	.	.	.	.	S	V	T	T	P	Y	E	V	A	V	I	D	E	I	Q	M	I	R	D	P	A	R	G	W	A	W	T	R	A	L	L	G	L	C	A	E	E	V	H	L	C	G
Template Known Secondary structure						S	S						S	S	S	.	.	S				S						G	G	G		.	.	.	.	.	.	.	.		S	S	S										G	G	G	G	G		T	T	T
Template Predicted Secondary structure																.	.															.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	T	L	E	G	D	A	I	Q	D	F	A	E	R	L	L	E	D	P	V	E	V	S	A	N	P	S	T	R	E	R	K	K	I	H	Q	W	Y	Y	R	A	D	D	L	E	H	K	T	A	L	L	V	H	L	L	K	Q	P	E	A	T	R	S	I	V	F	V	R	K	R	E	R	V	H	E	L	A	N	W
Query Conservation
Alig confidence						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	A	A	.	I	D	L	V	M	E	L	M	Y	T	T	G	E	E	V	E	V	R	D	Y	K	R	L	T	P	I	S	V	L	D	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	L	D	N	L	R	P	G	D	C	I	V	C	F	S	K	N	D	I	Y	S	V	S	R	Q
Template Known Secondary structure			G	G	G	.												T											S	S						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	T	T			T	T						S	S
Template Predicted Secondary structure						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																													.	.																																.	.	.
Query SS confidence																													.	.																																.	.	.
Query Sequence		L	R	E	A	G	I	N	N	C	Y	L	E	G	E	M	V	Q	G	K	R	N	E	A	I	K	R	L	.	.	T	E	G	R	V	N	V	L	V	A	T	D	V	A	A	R	G	I	D	I	P	D	V	S	H	V	F	N	F	D	M	.	.	.	P	R	S	G	D	T	Y	L	H	R	I	G	R	T	A	R	A
Query Conservation																													.	.																																.	.	.
Alig confidence																													.	.																						.										.	.	.
Template Conservation																																																				.
Template Sequence		I	E	I	R	G	L	E	S	A	V	I	Y	G	S	L	P	P	G	T	K	L	A	Q	A	K	K	F	N	D	P	N	D	P	C	K	I	L	V	A	T	D	A	I	G	M	G	L	N	L	S	.	I	R	R	I	I	F	Y	S	L	I	K	E	P	I	T	T	S	Q	A	L	Q	I	A	G	R	A	G	R	F
Template Known Secondary structure					T	T								T	T	S															T	T		S								G	G	G	G	S	S					.	B	S					S		S	B			B											T	T	B
Template Predicted Secondary structure																																																				.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		343				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		G	.	.	.	R	K	G	T	A	I	S	L	V	E	A	H	D	H	L	L	L	G	K	V	G
Query Conservation			.	.	.
Alig confidence			.	.	.										.
Template Conservation															.
Template Sequence		S	S	R	F	K	E	G	E	V	T	T	M	N	.	H	E	D	L	S	L	L	K	E	I	L
Template Known Secondary structure		T	T	T			S						S	S	.
Template Predicted Secondary structure															.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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