 |
Job Description | P21507 | Confidence | 93.68% | Date | Wed Jan 25 15:20:41 GMT 2012 |
Rank | 246 | Aligned Residues | 47 |
% Identity | 15% | Template | c3qmzA_ |
PDB info |
PDB header:motor protein | Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; |
PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain
|
Resolution | 6.00 Å |
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | I | P | P | A | L | D | G | R | D | V | L | G | S | A | P | T | G | T | G | K | T | A | A | Y | L | L | P | A | L | Q | H | L | L | D | F | P | R | K | K | . |
S | G | P | P | R | I | L | I | L | T | P |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
Q | F | Y | Y | M | Q | K | T | Q | Q | A | L | I | L | V | G | K | A | G | C | G | K | T | A | . |
. |
. |
. |
. |
T | W | K | T | V | I | D | A | M | A | I | F | D | G | H | A | N | V | V | Y | V | I | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S |
|
|
|  |  |  |  |
|
| T | T | S | S | T | T |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|
|  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2059 | 2060 | . | . | . | . | . | . | . | . | . | 2070 | . | . | . | . | . | . | . | . | . | 2080 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 2090 | . | . | . | . | . | . | . | . | . | 2100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|