Return to main results Retrieve Phyre Job Id

Job DescriptionP21507
Confidence87.12%DateWed Jan 25 15:20:41 GMT 2012
Rank410Aligned Residues52
% Identity13%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90......
Predicted Secondary structure 
















Query SS confidence 
























































Query Sequence  DGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHA
Query Conservation   
  


 








   



  
             


 

  
  
     
Alig confidence 
















.....


































Template Conservation    


 
 
  





..... 
  

  
                          
Template Sequence  NAKFIVIEGLEGAGKST. . . . . AIQVVVETLQQNGIDHITRTREPGGTLLAEKLRAL
Template Known Secondary structure 


STTS
.....TT


SS
SS
Template Predicted Secondary structure 







.....












Template SS confidence 
























































   2.......10........ .20.........30.........40.........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions