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Job DescriptionP21507
Confidence99.90%DateWed Jan 25 15:20:41 GMT 2012
Rank84Aligned Residues191
% Identity25%Templatec3earA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hera; PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  KIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
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Template Sequence  TYEEEAVPAPVRGRLEVLSDLLYVAS. PDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQGEVR
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   212.......220.........230....... ..240.........250.........260.........270.........280.........290
 
   301........310.........320.........330.........340.........350.........360.........370.........380
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Query Sequence  VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELR
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Template Sequence  VLVATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGRTGRGGR. . . VVLLYGPRERRDVEALERAVGRRFKRVNPPTPE
Template Known Secondary structure 
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   291........300.........310.........320.........330.... .....340.........350.........360.......
 
   381........390.........400.........410.....
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Query Sequence  PKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPR
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Template Sequence  EVLEAKWRHLLARLARVPEKDYRLYQDFAGRLFAE
Template Known Secondary structure  S
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   371........380.........390.........400.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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