Job Description P21507 Confidence 99.97% Date Wed Jan 25 15:20:41 GMT 2012 Rank 52 Aligned Residues 209 % Identity 33% Template c3dkpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp Resolution 2.10 Å

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		3	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		V	T	T	F	S	E	L	E	.	.	.	.	L	D	E	S	L	L	E	A	L	Q	D	K	G	F	T	R	P	T	A	I	Q	A	A	A	I	P	P	A	L	D	G	R	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A	L	Q	H	L	L	D	F	P	R	K	K	S	G	P	P	R
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																																																													.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		I	A	T	F	Q	Q	L	D	Q	E	Y	K	I	N	S	R	L	L	Q	N	I	L	D	A	G	F	Q	M	P	T	P	I	Q	M	Q	A	I	P	V	M	L	H	G	R	E	L	L	A	S	A	P	T	G	S	G	K	T	L	A	F	S	I	P	I	L	M	Q	L	K	Q	P	A	.	.	.	N	K	G	F	R
Template Known Secondary structure			S	S																					T	T			S														T	T									T	T	S																S			.	.	.	S	S	S
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																													.																									.	.
Query SS confidence																																													.																									.	.
Query Sequence		I	L	I	L	T	P	T	R	E	L	A	M	Q	V	S	D	H	A	R	E	L	A	K	H	T	H	L	D	I	A	T	I	T	G	G	V	A	Y	M	N	H	A	E	.	V	F	S	E	N	Q	D	I	V	V	A	T	T	G	R	L	L	Q	Y	I	K	E	E	N	.	.	F	D	C	R	A	V	E	T	L	I
Query Conservation																																													.																									.	.
Alig confidence																																													.																									.	.
Template Conservation
Template Sequence		A	L	I	I	S	P	T	R	E	L	A	S	Q	I	H	R	E	L	I	K	I	S	E	G	T	G	F	R	I	H	M	I	H	K	A	A	V	A	A	K	K	F	G	P	K	S	S	K	K	F	D	I	L	V	T	T	P	N	R	L	I	Y	L	L	K	Q	D	P	P	G	I	D	L	A	S	V	E	W	L	V
Template Known Secondary structure							S	S															T	T	T	S															T	T	T	S	T	T	S																				S	S	S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	D	E	A	D	R	M	L	D	.	M	G	F	A	Q	D	I	E	H	I	A	G	E	T	R	W	R	K	Q	T	L	L	F	S	A	T	L	E	G	D	A	I	Q	D	F	A	E	R	L	L	E	D	P	V	E	V	S	A	N	P
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		V	D	E	S	D	K	L	F	E	D	G	G	F	R	D	Q	L	A	S	I	F	L	A	C	T	S	H	K	V	R	R	A	M	F	S	A	T	F	A	Y	D	V	E	Q	W	C	K	L	N	L	D	N	V	I	S	V	S	I	G	A
Template Known Secondary structure			S	S																								T	T								S	S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions