Job Description P21507 Confidence 100.00% Date Wed Jan 25 15:20:41 GMT 2012 Rank 20 Aligned Residues 348 % Identity 18% Template c2zj2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1 Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		T	F	S	E	L	E	L	D	E	S	L	L	E	A	L	Q	D	K	G	F	T	R	P	T	A	I	Q	A	A	A	I	P	.	P	A	L	D	G	R	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A	L	Q	H	L	L	D	F	P	R	K	K	S	G	P	P	R	I	L	I	L	T
Query Conservation																																		.
Alig confidence																																		.																																				.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		R	V	D	E	L	R	V	D	E	R	I	K	S	T	L	K	E	R	G	I	E	S	F	Y	P	P	Q	A	E	A	L	K	S	G	I	L	E	G	K	N	A	L	I	S	I	P	T	A	S	G	K	T	L	I	A	E	I	A	M	V	H	R	I	L	T	Q	G	G	.	.	.	.	.	.	K	A	V	Y	I	V
Template Known Secondary structure		B	G	G	G	S		S											T	T			B										T	T	T	G	G	G	T							S		G	G	G	T																		S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	R	E	L	A	M	Q	V	S	D	H	A	R	E	L	A	K	H	T	H	L	D	I	A	T	I	T	G	G	V	A	Y	M	N	H	A	E	V	F	S	E	N	Q	D	I	V	V	A	T	T	G	R	L	L	Q	Y	I	K	E	E	N	F	D	C	R	A	V	E	T	L	I	L	D	E	A	D	R	M	L
Query Conservation
Alig confidence																			.																	.	.	.
Template Conservation																			.																	.	.	.
Template Sequence		P	L	K	A	L	A	E	E	K	F	Q	E	F	Q	D	W	E	.	K	I	G	L	R	V	A	M	A	T	G	D	Y	D	S	K	.	.	.	D	E	W	L	G	K	Y	D	I	I	I	A	T	A	E	K	F	D	S	L	L	R	H	G	S	S	W	I	K	D	V	K	I	L	V	A	D	E	I	H	L	I	G
Template Known Secondary structure		S	S	T	T	S								T	G	G	G	G	.	G	G	T								S			S			.	.	.		G	G	G	G	G		S																T		G	G	G	G	G								T	G	G	G	G	G
Template Predicted Secondary structure																			.																	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	G	F	A	Q	D	I	E	H	I	A	G	E	T	R	W	R	K	Q	T	L	L	F	S	A	T	L	E	G	D	A	I	Q	D	F	A	E	R	L	L	E	D	P	V	E	V	S	A	N	P	S	T	R	E	R	K	K	I	H	Q	W	Y	Y	R	A	D	D	L	E	H	K	T	A	L	L	V	H	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	D	R	G	A	T	L	E	V	I	L	A	H	M	L	G	K	A	Q	I	I	G	L	S	A	T	I	G	N	P	E	E	L	A	E	W	L	N	A	E	L	I	V	S	D	W	R	P	V	K	L	R	R	G	V	F	Y	Q	G	F	V	T	W	E	D	G	S	I	D	R	F	S	S	W	E	E	L	V	Y
Template Known Secondary structure			T	T	T												B	T	T	B										S									T	T										S	S									T	T					T	T	S						S	S	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		244	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																																		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	.	P	E	A	T	R	S	I	V	F	V	R	K	R	E	R	V	H	E	L	A	N	W	L	R	E	A	G	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	Y	L	E	G	E	M	V	Q	G	K	R	N	E
Query Conservation				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	R	K	K	K	G	A	L	I	F	V	N	M	R	R	K	A	E	R	V	A	L	E	L	S	K	K	V	K	S	L	L	T	K	P	E	I	R	A	L	N	E	L	A	D	S	L	E	E	N	P	T	N	E	K	L	A	K	A	I	R	G	G	V	A	F	H	H	A	G	L	G	R	D	E	R	V	L
Template Known Secondary structure						T	T								S	S																G	G	G																S			S												T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																					.	.	.	.																						.	.
Query SS confidence																																					.	.	.	.																						.	.
Query Sequence		A	I	K	R	L	T	E	G	R	V	N	V	L	V	A	T	D	V	A	A	R	G	I	D	I	P	D	V	S	H	V	F	N	F	D	.	.	.	.	M	P	R	S	G	D	T	Y	L	H	R	I	G	R	T	A	R	A	G	R	K	.	.	G	T	A	I	S	L	V	E	A	H	D	H	L	L	L	G	K
Query Conservation																																					.	.	.	.																						.	.
Alig confidence																																					.	.	.	.																						.	.
Template Conservation
Template Sequence		V	E	E	N	F	R	K	G	I	I	K	A	V	V	A	T	P	T	L	S	T	P	A	F	R	V	I	I	R	D	I	W	R	Y	S	D	F	G	M	E	R	I	P	I	I	E	V	H	Q	M	L	G	R	A	G	R	P	K	Y	D	E	V	G	E	G	I	I	V	S	T	S	D	D	P	R	E	V	M	N
Template Known Secondary structure								T	T	S	S							S	T	T				B	S							S					T	T															T	T	B			T	T	T		S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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