Job Description P21507 Confidence 95.15% Date Wed Jan 25 15:20:41 GMT 2012 Rank 192 Aligned Residues 44 % Identity 30% Template c1sxjB_ PDB info PDB header:replication Chain: B: PDB Molecule:activator 1 37 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		T	T	F	S	E	L	E	L	D	E	S	L	L	E	A	L	Q	D	K	G	F	T	R	P	T	A	I	Q	A	A	A	I	P	P	A	L	D	G	R	.	.	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A
Query Conservation																																									.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	S	D	I	V	G	N	K	E	T	I	D	R	L	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	K	D	G	N	M	P	H	M	I	I	S	G	M	P	G	I	G	K	T	T	S	V	H	C	L	A
Template Known Secondary structure		S	S	G	G	G			S		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S											S	T	T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions