Phyre 2 alignment of P21507 with c1i84V

Job Description P21507
Confidence 92.23% Date Wed Jan 25 15:20:41 GMT 2012

Rank 284 Aligned Residues 64

% Identity 22% Template c1i84V_

PDB info PDB header:contractile protein Chain: V: PDB Molecule:smooth muscle myosin heavy chain; PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.

Resolution 20.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure											.															.	.	.	.															.	.	.
Query SS confidence											.															.	.	.	.															.	.	.
Query Sequence	T	V	T	T	F	S	E	L	E	L	.	D	E	S	L	L	E	A	L	Q	D	K	G	F	T	.	.	.	.	R	P	T	A	I	Q	A	A	A	I	P	P	A	L	.	.	.	D	G	R	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A	L	Q	H	L
Query Conservation											.															.	.	.	.															.	.	.
Alig confidence											.															.	.	.	.															.	.	.																						.
Template Conservation																																																																				.
Template Sequence	V	I	N	P	Y	K	Q	L	P	I	Y	S	E	K	I	I	D	M	Y	K	G	K	K	R	H	E	M	P	P	H	I	Y	A	I	A	D	T	A	Y	R	S	M	L	Q	D	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	.	V	I	Q	Y	L
Template Known Secondary structure						S			S			S								S	S			S	S	S	S																			T										S	T	T	S	S	T	T						.
Template Predicted Secondary structure																																																																				.
Template SS confidence
	123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions