Job Description P21507 Confidence 100.00% Date Wed Jan 25 15:20:41 GMT 2012 Rank 14 Aligned Residues 392 % Identity 23% Template c1gl9B_ PDB info PDB header:topoisomerase Chain: B: PDB Molecule:reverse gyrase; PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp Resolution 3.2 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	Q	D	K	G	F	T	R	P	T	A	I	Q	A	A	A	I	P	P	A	L	D	G	R	D	V	L	G	S	A	P	T	G	T	G	K	T	A	A	Y	L	L	P	A	L	Q	H	L	L	D	F	P	R	K	K	S	G	P	P	R	I	L	I	L	T	P	T	R	E	L	A	M	Q	V	S	D	H	A
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.
Template Sequence		V	E	F	F	R	K	C	V	G	E	P	R	A	I	Q	K	M	W	A	K	R	I	L	R	K	E	S	F	A	A	T	A	P	T	G	V	G	K	T	S	F	G	L	A	M	S	L	F	L	A	.	.	.	.	.	.	.	L	K	G	K	R	C	Y	V	I	F	P	T	S	L	L	V	I	Q	A	A	E	T	I
Template Known Secondary structure									T		S														T	T									B	T	S															.	.	.	.	.	.	.	T	T	T								S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure												.	.	.	.																				.	.																																								.	.	.	.	.	.
Query SS confidence												.	.	.	.																				.	.																																								.	.	.	.	.	.
Query Sequence		R	E	L	A	K	H	T	H	L	D	.	.	.	.	I	A	T	I	T	G	G	V	A	Y	M	N	H	A	E	V	F	S	E	.	.	N	Q	D	I	V	V	A	T	T	G	R	L	L	Q	Y	I	K	E	E	N	F	D	C	R	A	V	E	T	L	I	L	D	E	A	D	R	M	L	D	.	.	.	.	.	.
Query Conservation												.	.	.	.																				.	.																																								.	.	.	.	.	.
Alig confidence												.	.	.	.																				.	.																		.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		R	K	Y	A	E	K	A	G	V	G	T	E	N	L	I	G	Y	Y	H	G	R	I	P	K	R	E	K	E	N	F	M	Q	N	L	R	N	F	K	I	V	I	T	T	T	Q	F	L	S	K	H	Y	R	.	.	.	.	E	L	G	H	F	D	F	I	F	V	D	D	V	D	A	I	L	K	A	S	K	N	V	D
Template Known Secondary structure						T	T	T					T	T	T						S												T	T	T	T	S		S													S	S	.	.	.	.	S	S				S					S		S					T	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
							165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	M	G	F	A	Q	D	I	E	H	I	A	G	E	T	R	W	R	K	Q	T	L	L	F	S	A	T	L	E	G	D	A	I	Q	D	F	A	E	R	L	L	E	D	P	V	E	V	S	A	N	P	S	T	R	E	R	K	K	I	H	Q	W	Y	Y	R	A	D	D	L	E	H	K	T	A	L	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																										.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		K	L	L	H	L	L	G	F	H	Y	D	L	K	T	K	S	W	V	G	E	A	R	G	C	L	M	V	S	T	A	T	A	K	K	G	K	K	A	E	L	F	R	Q	L	L	N	.	.	.	.	F	D	I	G	S	S	R	I	T	V	R	N	V	E	D	V	A	V	N	D	E	S	I	S	T	L	S	S	I	L
Template Known Secondary structure								T				B	T	T	T	T	B							S							B	S	S				T	T	T								S	.	.	.	.					B	S													S				T	T	T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		V	H	L	L	K	Q	P	E	A	T	R	S	I	V	F	V	R	K	R	E	R	V	H	E	L	A	N	W	L	R	E	A	G	I	N	N	C	Y	L	E	G	E	M	V	Q	G	K	R	N	E	A	I	K	R	L	T	E	G	R	V	N	V	L	V	A	.	.	.	.	T	D	V	A	A	R	G	I	D	I	P
Query Conservation																																																																			.	.	.	.
Alig confidence					.	.	.	.	.																									.	.	.	.	.	.																												.	.	.	.
Template Conservation					.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		E	K	L	.	.	.	.	.	G	T	G	G	I	I	Y	A	R	T	G	E	E	A	E	E	I	Y	E	S	L	K	N	K	.	.	.	.	.	.	F	R	I	G	I	V	T	A	T	K	K	G	D	Y	E	K	F	V	E	G	E	I	D	H	L	I	G	T	A	H	Y	Y	G	T	L	V	R	G	L	D	L	P
Template Known Secondary structure		T	T	S	.	.	.	.	.		S							S	S									T	T	S	S	S	S	.	.	.	.	.	.	S				B		S	S	S										T	T	S		S												T	G	G	G	T			T
Template Predicted Secondary structure					.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		272	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		316		.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	V	S	H	V	F	N	F	D	M	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	I	R	F	A	V	F	V	G	C	P	S	F	R	V	T	I	E	D	I	D	S	L	S	P	Q	M	V	K	L	L	A	Y	L	Y	R	N	V	D	E	I	E	R	L	L	P	A	V	E	R	H	I	D	E	V	R	E	I	L	K	K	V	M	G	K	E	R	P	Q	A	K	D	V	V	V	R	E	G	E
Template Known Secondary structure		T	T								S								T	T	T		S	S	S		G	G	G						S	S			T	T	T	T					S	S		S	T	T		S										S	S	S	S						S	S	S	B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
						328	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure		.	.	.	.															.	.																												.
Query SS confidence		.	.	.	.															.	.																												.
Query Sequence		.	.	.	.	S	G	D	T	Y	L	H	R	I	G	R	T	A	R	.	.	A	G	R	K	G	T	A	I	S	L	V	E	A	H	D	H	L	L	L	G	K	V	G	R	Y	I	E	.	E	P	I	K	A	R	V	I	D	E	L	R	P	K	T	R	A	P	S	E	K	Q	T	G	K	P	S	K	K	V	L	A
Query Conservation		.	.	.	.															.	.																												.
Alig confidence		.	.	.	.															.	.																												.
Template Conservation
Template Sequence		V	I	F	P	D	L	R	T	Y	I	Q	G	S	G	R	T	S	R	L	F	A	G	G	L	T	K	G	A	S	F	L	L	E	D	D	S	E	L	L	S	A	F	I	E	R	A	K	L	Y	D	I	E	F	K	S	I	D	E	V	D	F	E	K	L	S	R	E	L	D	E	S	R	D	R	Y	R	R	R	Q	E
Template Known Secondary structure																T	T					T	T												S														T	T	S	S						S		S		T																G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	E	K	K	K	A	K	E	K	E	K	P	R	V	K	K	R	H	R	D	T	K	N	I	G	K	R	R	K	P	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	L	I	K	P	A	L	F	I	V	E	S	P	T	K	A	R	Q	I	S	R	F	F	G	K	P	S	V	K	V	L	D	G
Template Known Secondary structure													S	S										T	T	S			B					T	T
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.