Job Description P75693 Confidence 1.56% Date Thu Jan 5 12:13:12 GMT 2012 Rank 20 Aligned Residues 171 % Identity 11% Template c3rkoM_ PDB info PDB header:oxidoreductase Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	R	A	G	V	L	T	G	L	G	V	A	L	G	D	A	F	Y	S	G	L	G	L	F	G	L	A	T	L	I	T	Q	C	E	E	I	F	S	L	I	R	I	V	G	G	A	Y	L	L	W	F	A	W	C	S	M	R	R	Q	S	T	P	Q	M	S	T	L	Q	Q	.	.	.	P	I	S	A	P	W	Y	V
Query Conservation																																																																							.	.	.
Alig confidence																																																																							.	.	.
Template Conservation
Template Sequence		A	Q	T	D	I	K	R	L	I	A	Y	T	S	V	S	H	M	G	F	V	L	I	A	I	Y	T	G	S	Q	L	A	Y	Q	G	A	V	I	Q	M	I	A	H	G	L	S	A	A	G	L	F	I	L	C	G	Q	L	Y	E	R	I	H	T	R	D	M	R	M	M	G	G	L	W	S	K	M	K	W	L	P	A
Template Known Secondary structure		T		S	B																					T	S																																						B	G	G	G			S	G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	R	R	G	L	I	T	D	L	S	N	P	Q	T	V	L	F	F	I	S	I	F	S	V	T	L	N	A	E	T	P	T	W	A	R	L	M	A	W	A	G	I	V	L	A	S	I	I	W	R	V	F	L	S	Q	A	F	S	L	P	A	V	R	R	A	Y	G	R	M	Q	R	V	A	S	R	V	I	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	L	F	F	A	V	A	T	L	G	M	P	G	T	G	N	F	V	G	E	F	M	I	L	F	G	S	F	Q	V	V	P	V	I	T	V	I	S	T	F	G	L	V	F	A	S	V	Y	S	L	A	M	L	H	R	A	Y	F	G	K	A	K	S	Q	I	A	S	Q	E	L	P	G	M	S	L	R	E	L	F
Template Known Secondary structure											S			T	T	S																																												S	S	S	S		S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	V	F	A	L	R	L	I	Y	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	L	L	L	V	V	L	L	V	L	L	G	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		467	.	.	470	.	.	.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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